The 2.0 version of rSNPBase

Variant report

Variant rs12403862
Chromosome Location chr1:161797348-161797349
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161753400-161800600 Weak transcription Spleen Spleen
2 chr1:161762800-161797600 Weak transcription HMEC breast
3 chr1:161763000-161797400 Weak transcription NHLF lung
4 chr1:161773400-161854400 Weak transcription Small Intestine intestine
5 chr1:161780400-161798800 Strong transcription Primary monocytes fromperipheralblood blood
6 chr1:161780400-161824400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:161780600-161798800 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr1:161780600-161808200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:161780600-161823400 Weak transcription A549 lung
10 chr1:161780600-161836600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:161780800-161797600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:161780800-161798200 Weak transcription Psoas Muscle Psoas
13 chr1:161780800-161812400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:161780800-161823000 Weak transcription HSMMtube muscle
15 chr1:161780800-161825800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:161780800-161834000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:161781000-161823000 Weak transcription Fetal Kidney kidney
18 chr1:161781400-161801000 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr1:161785400-161822400 Weak transcription Fetal Intestine Small intestine
20 chr1:161787400-161804600 Weak transcription NHDF-Ad bronchial
21 chr1:161787600-161809800 Weak transcription Rectal Smooth Muscle rectum
22 chr1:161787600-161821000 Weak transcription Stomach Smooth Muscle stomach
23 chr1:161789600-161798800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:161789800-161798800 Strong transcription Primary T cells from cord blood blood
25 chr1:161790200-161816000 Weak transcription NHEK skin
26 chr1:161791400-161823000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:161791600-161805200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:161791600-161812800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:161791600-161816200 Weak transcription HepG2 liver
30 chr1:161791600-161823000 Weak transcription Fetal Lung lung
31 chr1:161791800-161797400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:161791800-161798000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:161791800-161808200 Weak transcription Right Ventricle heart
34 chr1:161791800-161819800 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:161791800-161820800 Weak transcription Brain Hippocampus Middle brain
36 chr1:161791800-161822400 Weak transcription Thymus Thymus
37 chr1:161791800-161823000 Weak transcription Fetal Brain Female brain
38 chr1:161791800-161823600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:161791800-161842000 Weak transcription Brain Angular Gyrus brain
40 chr1:161792000-161822400 Weak transcription Aorta Aorta
41 chr1:161792000-161823200 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr1:161792200-161797800 Weak transcription Brain Cingulate Gyrus brain
43 chr1:161792200-161798000 Weak transcription K562 blood
44 chr1:161792200-161806400 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr1:161792200-161807800 Weak transcription Colon Smooth Muscle Colon
46 chr1:161792200-161816000 Weak transcription Brain Anterior Caudate brain
47 chr1:161792200-161816200 Weak transcription Duodenum Mucosa Duodenum
48 chr1:161792200-161816800 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr1:161792200-161821000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:161792200-161838000 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015