The 2.0 version of rSNPBase

Variant report

Variant rs3817085
Chromosome Location chr1:161789625-161789626
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
2 chr1:161738600-161795600 Weak transcription Gastric stomach
3 chr1:161753400-161800600 Weak transcription Spleen Spleen
4 chr1:161755000-161793600 Weak transcription Colonic Mucosa Colon
5 chr1:161757400-161797000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:161762200-161790600 Weak transcription Fetal Brain Male brain
7 chr1:161762400-161790800 Weak transcription NH-A brain
8 chr1:161762400-161791200 Weak transcription Right Ventricle heart
9 chr1:161762400-161795400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:161762800-161797600 Weak transcription HMEC breast
11 chr1:161763000-161797400 Weak transcription NHLF lung
12 chr1:161766000-161790800 Weak transcription Lung lung
13 chr1:161767400-161791200 Weak transcription Aorta Aorta
14 chr1:161773000-161790600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:161773400-161789800 Weak transcription Brain Substantia Nigra brain
16 chr1:161773400-161790800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:161773400-161797200 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:161773400-161854400 Weak transcription Small Intestine intestine
19 chr1:161775800-161794800 Weak transcription Fetal Stomach stomach
20 chr1:161780000-161789800 Weak transcription Ovary ovary
21 chr1:161780200-161797200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:161780400-161791200 Weak transcription Brain Angular Gyrus brain
23 chr1:161780400-161791200 Weak transcription Thymus Thymus
24 chr1:161780400-161795000 Weak transcription Esophagus oesophagus
25 chr1:161780400-161795000 Weak transcription Left Ventricle heart
26 chr1:161780400-161798800 Strong transcription Primary monocytes fromperipheralblood blood
27 chr1:161780400-161824400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:161780600-161789800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:161780600-161790800 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:161780600-161790800 Weak transcription HSMM muscle
31 chr1:161780600-161791000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr1:161780600-161791400 Weak transcription Brain Hippocampus Middle brain
33 chr1:161780600-161798800 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr1:161780600-161808200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:161780600-161823400 Weak transcription A549 lung
36 chr1:161780600-161836600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:161780800-161789800 Weak transcription Primary T cells from cord blood blood
38 chr1:161780800-161789800 Weak transcription Fetal Intestine Large intestine
39 chr1:161780800-161789800 Weak transcription Fetal Muscle Leg muscle
40 chr1:161780800-161789800 Weak transcription NHEK skin
41 chr1:161780800-161790000 Weak transcription Fetal Muscle Trunk muscle
42 chr1:161780800-161790200 Weak transcription Brain Anterior Caudate brain
43 chr1:161780800-161790800 Weak transcription Fetal Lung lung
44 chr1:161780800-161790800 Weak transcription HUVEC blood vessel
45 chr1:161780800-161791000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr1:161780800-161791000 Weak transcription Brain Cingulate Gyrus brain
47 chr1:161780800-161791000 Weak transcription Fetal Brain Female brain
48 chr1:161780800-161795000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:161780800-161795200 Weak transcription Brain Germinal Matrix brain
50 chr1:161780800-161795600 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015