The 2.0 version of rSNPBase

Variant report

Variant rs2341477
Chromosome Location chr1:161879184-161879185
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:161824400-161882000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:161836600-161888400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:161859200-161885400 Weak transcription Psoas Muscle Psoas
5 chr1:161859400-161882600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:161859400-161882800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:161861200-161881200 Weak transcription Ovary ovary
8 chr1:161861400-161879400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:161861400-161881200 Weak transcription Aorta Aorta
10 chr1:161861400-161881800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:161861400-161882000 Weak transcription Adipose Nuclei Adipose
12 chr1:161861400-161884000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:161861400-161884000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:161861400-161884400 Weak transcription Fetal Intestine Large intestine
15 chr1:161861600-161880000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:161861600-161881000 Weak transcription Primary B cells from cord blood blood
17 chr1:161861600-161882400 Weak transcription Placenta Placenta
18 chr1:161861600-161882400 Weak transcription Dnd41 blood
19 chr1:161861600-161883400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:161861600-161883800 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr1:161861600-161884000 Weak transcription Fetal Muscle Leg muscle
22 chr1:161861600-161884000 Weak transcription Left Ventricle heart
23 chr1:161861600-161884000 Weak transcription Pancreas Pancrea
24 chr1:161861600-161884000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:161861600-161891400 Weak transcription Rectal Smooth Muscle rectum
26 chr1:161861600-161906400 Weak transcription Stomach Smooth Muscle stomach
27 chr1:161861600-161936000 Weak transcription Fetal Intestine Small intestine
28 chr1:161861800-161881400 Weak transcription Primary B cells from peripheral blood blood
29 chr1:161861800-161882400 Weak transcription Liver Liver
30 chr1:161861800-161883800 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr1:161862000-161882000 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:161862000-161883400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:161862200-161881000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:161862400-161881800 Weak transcription Primary hematopoietic stem cells blood
35 chr1:161863400-161881600 Weak transcription Primary monocytes fromperipheralblood blood
36 chr1:161872400-161880400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr1:161874200-161884200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:161874400-161884000 Weak transcription NHEK skin
39 chr1:161875000-161884000 Weak transcription GM12878-XiMat blood
40 chr1:161875200-161882400 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr1:161875200-161884200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:161875400-161879800 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:161875400-161881200 Weak transcription Primary T cells from cord blood blood
44 chr1:161875400-161881800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:161875400-161882000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:161875600-161883000 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr1:161875600-161888400 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr1:161875800-161884000 Weak transcription Gastric stomach
49 chr1:161876800-161881600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:161876800-161883400 Weak transcription K562 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015