The 2.0 version of rSNPBase

Variant report

Variant rs4657108
Chromosome Location chr1:161779164-161779165
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
2 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
3 chr1:161738600-161795600 Weak transcription Gastric stomach
4 chr1:161745400-161780000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:161748200-161780000 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:161749200-161780000 Strong transcription Primary monocytes fromperipheralblood blood
7 chr1:161752200-161780000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:161753200-161780000 Weak transcription Esophagus oesophagus
9 chr1:161753400-161800600 Weak transcription Spleen Spleen
10 chr1:161755000-161793600 Weak transcription Colonic Mucosa Colon
11 chr1:161755400-161780000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:161757400-161797000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:161760400-161780200 Weak transcription A549 lung
14 chr1:161762200-161779800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:161762200-161780000 Weak transcription Thymus Thymus
16 chr1:161762200-161790600 Weak transcription Fetal Brain Male brain
17 chr1:161762400-161779800 Weak transcription Brain Cingulate Gyrus brain
18 chr1:161762400-161790800 Weak transcription NH-A brain
19 chr1:161762400-161791200 Weak transcription Right Ventricle heart
20 chr1:161762400-161795400 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr1:161762800-161797600 Weak transcription HMEC breast
22 chr1:161763000-161797400 Weak transcription NHLF lung
23 chr1:161763400-161779800 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr1:161763400-161780000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:161764800-161780200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:161765800-161779800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:161765800-161779800 Weak transcription Ovary ovary
28 chr1:161765800-161780200 Weak transcription Brain Angular Gyrus brain
29 chr1:161766000-161780600 Weak transcription Brain Anterior Caudate brain
30 chr1:161766000-161790800 Weak transcription Lung lung
31 chr1:161767400-161779800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:161767400-161791200 Weak transcription Aorta Aorta
33 chr1:161768000-161779800 Weak transcription Fetal Lung lung
34 chr1:161768000-161780000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:161768000-161789400 Weak transcription HepG2 liver
36 chr1:161772000-161779800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:161772000-161780200 Weak transcription Psoas Muscle Psoas
38 chr1:161772000-161782200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:161772200-161780000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:161772200-161780200 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr1:161772200-161789400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:161772400-161779800 Weak transcription Fetal Muscle Trunk muscle
43 chr1:161772400-161779800 Weak transcription HSMMtube muscle
44 chr1:161772400-161780200 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr1:161772400-161780200 Weak transcription NHDF-Ad bronchial
46 chr1:161772600-161780200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:161772600-161785800 Weak transcription Hela-S3 cervix
48 chr1:161772800-161780000 Weak transcription Fetal Kidney kidney
49 chr1:161773000-161790600 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr1:161773400-161779800 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015