The 2.0 version of rSNPBase

Variant report

Variant rs12036538
Chromosome Location chr1:161739800-161739801
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161736800-161740000 Enhancers Small Intestine intestine
2 chr1:161736800-161752000 Weak transcription Lung lung
3 chr1:161736800-161754000 Weak transcription Colonic Mucosa Colon
4 chr1:161736800-161757200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:161737000-161740200 Enhancers Colon Smooth Muscle Colon
6 chr1:161737000-161740600 Enhancers Primary T killer memory cells from peripheral blood blood
7 chr1:161737000-161741000 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr1:161737000-161743800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:161737000-161745400 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr1:161737000-161751600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:161737000-161752000 Weak transcription Left Ventricle heart
12 chr1:161737000-161765600 Weak transcription Aorta Aorta
13 chr1:161737200-161740800 Enhancers Primary T cells from cord blood blood
14 chr1:161737200-161741400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:161737200-161741600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:161737200-161744000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:161737200-161745000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr1:161737200-161746600 Weak transcription NHLF lung
19 chr1:161737200-161748000 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr1:161737200-161751200 Weak transcription Placenta Placenta
21 chr1:161737200-161751400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:161737200-161752200 Weak transcription Psoas Muscle Psoas
23 chr1:161737200-161752600 Weak transcription Esophagus oesophagus
24 chr1:161737200-161752800 Weak transcription HSMMtube muscle
25 chr1:161737200-161761600 Weak transcription Fetal Brain Male brain
26 chr1:161737200-161761600 Weak transcription Right Ventricle heart
27 chr1:161737200-161775200 Weak transcription Fetal Stomach stomach
28 chr1:161737200-161775800 Weak transcription Stomach Mucosa stomach
29 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
30 chr1:161737400-161740400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:161737400-161740600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:161737400-161740800 Weak transcription A549 lung
33 chr1:161737400-161741200 Enhancers Primary T helper cells fromperipheralblood blood
34 chr1:161737400-161750400 Weak transcription Fetal Intestine Large intestine
35 chr1:161737400-161751400 Weak transcription Osteobl bone
36 chr1:161737400-161752200 Weak transcription HSMM muscle
37 chr1:161737600-161740000 Weak transcription Brain Substantia Nigra brain
38 chr1:161737600-161740200 Weak transcription Brain Angular Gyrus brain
39 chr1:161737600-161740400 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr1:161737600-161741000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:161737600-161741400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:161737600-161745400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr1:161737600-161751400 Weak transcription NHDF-Ad bronchial
44 chr1:161737600-161752000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr1:161737600-161762000 Weak transcription Fetal Lung lung
46 chr1:161737600-161764600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:161737800-161750400 Weak transcription Brain Germinal Matrix brain
48 chr1:161738000-161741200 Weak transcription Primary B cells from cord blood blood
49 chr1:161738000-161752400 Weak transcription Duodenum Mucosa Duodenum
50 chr1:161738200-161739800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015