The 2.0 version of rSNPBase

Variant report

Variant rs16864153
Chromosome Location chr1:161737536-161737537
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161734600-161737600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr1:161736200-161737600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr1:161736400-161737600 Flanking Active TSS Primary B cells from cord blood blood
4 chr1:161736400-161737600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:161736400-161737600 Flanking Active TSS Duodenum Mucosa Duodenum
6 chr1:161736400-161737600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr1:161736400-161738200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr1:161736600-161737600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:161736600-161737600 Flanking Active TSS Brain Anterior Caudate brain
10 chr1:161736600-161737800 Weak transcription Spleen Spleen
11 chr1:161736600-161738600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
12 chr1:161736800-161737600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:161736800-161737600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
14 chr1:161736800-161737600 Enhancers Fetal Heart heart
15 chr1:161736800-161737800 Weak transcription Gastric stomach
16 chr1:161736800-161737800 Flanking Active TSS Hela-S3 cervix
17 chr1:161736800-161738600 Flanking Active TSS Liver Liver
18 chr1:161736800-161738600 Flanking Active TSS Dnd41 blood
19 chr1:161736800-161740000 Enhancers Small Intestine intestine
20 chr1:161736800-161752000 Weak transcription Lung lung
21 chr1:161736800-161754000 Weak transcription Colonic Mucosa Colon
22 chr1:161736800-161757200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:161737000-161737600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
24 chr1:161737000-161737600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:161737000-161737600 Enhancers Brain Cingulate Gyrus brain
26 chr1:161737000-161737600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
27 chr1:161737000-161737600 Flanking Active TSS Pancreatic Islets Pancreatic Islet
28 chr1:161737000-161737600 Flanking Active TSS GM12878-XiMat blood
29 chr1:161737000-161737600 Flanking Active TSS HepG2 liver
30 chr1:161737000-161737800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:161737000-161737800 Enhancers Fetal Thymus thymus
32 chr1:161737000-161738000 Weak transcription Ovary ovary
33 chr1:161737000-161738200 Enhancers Rectal Smooth Muscle rectum
34 chr1:161737000-161738400 Enhancers Primary B cells from peripheral blood blood
35 chr1:161737000-161738600 Enhancers Primary monocytes fromperipheralblood blood
36 chr1:161737000-161738600 Enhancers Primary T cells fromperipheralblood blood
37 chr1:161737000-161738600 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr1:161737000-161738600 Enhancers Primary mononuclear cells fromperipheralblood Blood
39 chr1:161737000-161740200 Enhancers Colon Smooth Muscle Colon
40 chr1:161737000-161740600 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr1:161737000-161741000 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr1:161737000-161743800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:161737000-161745400 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr1:161737000-161751600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:161737000-161752000 Weak transcription Left Ventricle heart
46 chr1:161737000-161765600 Weak transcription Aorta Aorta
47 chr1:161737200-161737600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:161737200-161737600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:161737200-161737600 Enhancers Muscle Satellite Cultured Cells --
50 chr1:161737200-161737600 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015