The 2.0 version of rSNPBase

Variant report

Variant rs2089085
Chromosome Location chr1:161741892-161741893
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161736800-161752000 Weak transcription Lung lung
2 chr1:161736800-161754000 Weak transcription Colonic Mucosa Colon
3 chr1:161736800-161757200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:161737000-161743800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:161737000-161745400 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr1:161737000-161751600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:161737000-161752000 Weak transcription Left Ventricle heart
8 chr1:161737000-161765600 Weak transcription Aorta Aorta
9 chr1:161737200-161744000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:161737200-161745000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr1:161737200-161746600 Weak transcription NHLF lung
12 chr1:161737200-161748000 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr1:161737200-161751200 Weak transcription Placenta Placenta
14 chr1:161737200-161751400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:161737200-161752200 Weak transcription Psoas Muscle Psoas
16 chr1:161737200-161752600 Weak transcription Esophagus oesophagus
17 chr1:161737200-161752800 Weak transcription HSMMtube muscle
18 chr1:161737200-161761600 Weak transcription Fetal Brain Male brain
19 chr1:161737200-161761600 Weak transcription Right Ventricle heart
20 chr1:161737200-161775200 Weak transcription Fetal Stomach stomach
21 chr1:161737200-161775800 Weak transcription Stomach Mucosa stomach
22 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
23 chr1:161737400-161750400 Weak transcription Fetal Intestine Large intestine
24 chr1:161737400-161751400 Weak transcription Osteobl bone
25 chr1:161737400-161752200 Weak transcription HSMM muscle
26 chr1:161737600-161745400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr1:161737600-161751400 Weak transcription NHDF-Ad bronchial
28 chr1:161737600-161752000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:161737600-161762000 Weak transcription Fetal Lung lung
30 chr1:161737600-161764600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:161737800-161750400 Weak transcription Brain Germinal Matrix brain
32 chr1:161738000-161752400 Weak transcription Duodenum Mucosa Duodenum
33 chr1:161738200-161743400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:161738200-161752200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:161738200-161753600 Weak transcription Rectal Smooth Muscle rectum
36 chr1:161738200-161760200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:161738400-161751200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:161738400-161754000 Weak transcription Fetal Brain Female brain
39 chr1:161738600-161743400 Weak transcription Hela-S3 cervix
40 chr1:161738600-161747600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr1:161738600-161752200 Weak transcription HepG2 liver
42 chr1:161738600-161752600 Weak transcription Stomach Smooth Muscle stomach
43 chr1:161738600-161753800 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
45 chr1:161738600-161795600 Weak transcription Gastric stomach
46 chr1:161739400-161752600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:161739400-161753800 Weak transcription NH-A brain
48 chr1:161739400-161753800 Weak transcription NHEK skin
49 chr1:161739600-161742200 Enhancers HUVEC blood vessel
50 chr1:161739600-161742400 Enhancers Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015