The 2.0 version of rSNPBase

Variant report

Variant rs16849963
Chromosome Location chr1:161791247-161791248
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
2 chr1:161738600-161795600 Weak transcription Gastric stomach
3 chr1:161753400-161800600 Weak transcription Spleen Spleen
4 chr1:161755000-161793600 Weak transcription Colonic Mucosa Colon
5 chr1:161757400-161797000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:161762400-161795400 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:161762800-161797600 Weak transcription HMEC breast
8 chr1:161763000-161797400 Weak transcription NHLF lung
9 chr1:161773400-161797200 Weak transcription Muscle Satellite Cultured Cells --
10 chr1:161773400-161854400 Weak transcription Small Intestine intestine
11 chr1:161775800-161794800 Weak transcription Fetal Stomach stomach
12 chr1:161780200-161797200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:161780400-161795000 Weak transcription Esophagus oesophagus
14 chr1:161780400-161795000 Weak transcription Left Ventricle heart
15 chr1:161780400-161798800 Strong transcription Primary monocytes fromperipheralblood blood
16 chr1:161780400-161824400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:161780600-161791400 Weak transcription Brain Hippocampus Middle brain
18 chr1:161780600-161798800 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr1:161780600-161808200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:161780600-161823400 Weak transcription A549 lung
21 chr1:161780600-161836600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:161780800-161795000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:161780800-161795200 Weak transcription Brain Germinal Matrix brain
24 chr1:161780800-161795600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:161780800-161797600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:161780800-161798200 Weak transcription Psoas Muscle Psoas
27 chr1:161780800-161812400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:161780800-161823000 Weak transcription HSMMtube muscle
29 chr1:161780800-161825800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:161780800-161834000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:161781000-161823000 Weak transcription Fetal Kidney kidney
32 chr1:161781200-161796600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:161781400-161801000 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:161783200-161795400 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr1:161785400-161822400 Weak transcription Fetal Intestine Small intestine
36 chr1:161786000-161797000 Weak transcription Osteobl bone
37 chr1:161786800-161797000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:161786800-161797200 Weak transcription Hela-S3 cervix
39 chr1:161787400-161804600 Weak transcription NHDF-Ad bronchial
40 chr1:161787600-161797000 Weak transcription Fetal Heart heart
41 chr1:161787600-161809800 Weak transcription Rectal Smooth Muscle rectum
42 chr1:161787600-161821000 Weak transcription Stomach Smooth Muscle stomach
43 chr1:161788000-161792800 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr1:161788200-161792200 Strong transcription Primary B cells from cord blood blood
45 chr1:161788600-161795000 Weak transcription Stomach Mucosa stomach
46 chr1:161788800-161796400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr1:161789000-161792000 Weak transcription Placenta Amnion Placenta Amnion
48 chr1:161789200-161795200 Strong transcription Primary T helper cells PMA-I stimulated --
49 chr1:161789400-161791400 Strong transcription Skeletal Muscle Male skeletal muscle
50 chr1:161789400-161791600 Strong transcription HepG2 liver

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Last update: Aug 31, 2015