The 2.0 version of rSNPBase

Variant report

Variant rs7523416
Chromosome Location chr1:161860294-161860295
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161808400-161863200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:161824400-161882000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:161825600-161863200 Weak transcription Fetal Heart heart
5 chr1:161826200-161860400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:161834400-161863200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:161836600-161868000 Weak transcription Fetal Kidney kidney
8 chr1:161836600-161888400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:161836800-161861000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:161841000-161863000 Weak transcription HepG2 liver
11 chr1:161842400-161863600 Weak transcription Brain Angular Gyrus brain
12 chr1:161843200-161864800 Weak transcription Brain Substantia Nigra brain
13 chr1:161854600-161871400 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:161855000-161860400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:161855000-161860600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:161855000-161860600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:161855200-161860400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:161855200-161860400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:161855200-161860400 Weak transcription Fetal Stomach stomach
20 chr1:161855200-161861000 Weak transcription Fetal Lung lung
21 chr1:161855200-161867400 Weak transcription NHEK skin
22 chr1:161855400-161860400 Weak transcription NH-A brain
23 chr1:161855400-161860600 Weak transcription Brain Germinal Matrix brain
24 chr1:161855400-161860800 Weak transcription HSMM muscle
25 chr1:161855400-161861000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:161855400-161879000 Weak transcription Hela-S3 cervix
27 chr1:161855800-161862200 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr1:161855800-161864400 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:161856000-161860400 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:161856000-161860800 Weak transcription NHLF lung
31 chr1:161856000-161861800 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr1:161856000-161862600 Weak transcription Colonic Mucosa Colon
33 chr1:161856000-161863200 Weak transcription Fetal Brain Female brain
34 chr1:161856000-161863200 Weak transcription Osteobl bone
35 chr1:161856400-161861400 Strong transcription Primary monocytes fromperipheralblood blood
36 chr1:161856400-161861400 Strong transcription Adipose Nuclei Adipose
37 chr1:161856400-161861400 Strong transcription Fetal Intestine Large intestine
38 chr1:161856400-161861600 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr1:161856400-161861800 Strong transcription Liver Liver
40 chr1:161856600-161861000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:161856600-161861600 Strong transcription Primary B cells from cord blood blood
42 chr1:161856600-161861600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:161856800-161861600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:161857000-161860400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:161857200-161860400 Weak transcription Gastric stomach
46 chr1:161857200-161860400 Weak transcription Left Ventricle heart
47 chr1:161857200-161860600 Weak transcription Brain Hippocampus Middle brain
48 chr1:161857200-161861600 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr1:161857200-161861600 Strong transcription Dnd41 blood
50 chr1:161857400-161861800 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015