The 2.0 version of rSNPBase

Variant report

Variant rs4656333
Chromosome Location chr1:161777818-161777819
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
2 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
3 chr1:161738600-161795600 Weak transcription Gastric stomach
4 chr1:161745400-161780000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:161748000-161778800 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr1:161748200-161780000 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr1:161749200-161780000 Strong transcription Primary monocytes fromperipheralblood blood
8 chr1:161752200-161780000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:161753200-161780000 Weak transcription Esophagus oesophagus
10 chr1:161753400-161800600 Weak transcription Spleen Spleen
11 chr1:161755000-161793600 Weak transcription Colonic Mucosa Colon
12 chr1:161755400-161780000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:161757400-161778400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:161757400-161797000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:161760400-161780200 Weak transcription A549 lung
16 chr1:161762200-161779800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:161762200-161780000 Weak transcription Thymus Thymus
18 chr1:161762200-161790600 Weak transcription Fetal Brain Male brain
19 chr1:161762400-161779800 Weak transcription Brain Cingulate Gyrus brain
20 chr1:161762400-161790800 Weak transcription NH-A brain
21 chr1:161762400-161791200 Weak transcription Right Ventricle heart
22 chr1:161762400-161795400 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr1:161762800-161797600 Weak transcription HMEC breast
24 chr1:161763000-161797400 Weak transcription NHLF lung
25 chr1:161763400-161779800 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr1:161763400-161780000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:161764800-161780200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:161765800-161779800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:161765800-161779800 Weak transcription Ovary ovary
30 chr1:161765800-161780200 Weak transcription Brain Angular Gyrus brain
31 chr1:161766000-161780600 Weak transcription Brain Anterior Caudate brain
32 chr1:161766000-161790800 Weak transcription Lung lung
33 chr1:161767400-161779800 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:161767400-161791200 Weak transcription Aorta Aorta
35 chr1:161768000-161779800 Weak transcription Fetal Lung lung
36 chr1:161768000-161780000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:161768000-161789400 Weak transcription HepG2 liver
38 chr1:161772000-161779000 Weak transcription Left Ventricle heart
39 chr1:161772000-161779800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:161772000-161780200 Weak transcription Psoas Muscle Psoas
41 chr1:161772000-161782200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr1:161772200-161778400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr1:161772200-161780000 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr1:161772200-161780200 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr1:161772200-161789400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:161772400-161779800 Weak transcription Fetal Muscle Trunk muscle
47 chr1:161772400-161779800 Weak transcription HSMMtube muscle
48 chr1:161772400-161780200 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr1:161772400-161780200 Weak transcription NHDF-Ad bronchial
50 chr1:161772600-161780200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015