The 2.0 version of rSNPBase

Variant report

Variant rs16858113
Chromosome Location chr1:161843476-161843477
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161773400-161854400 Weak transcription Small Intestine intestine
2 chr1:161795200-161860200 Weak transcription Lung lung
3 chr1:161795800-161859000 Weak transcription Pancreas Pancrea
4 chr1:161805800-161846200 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:161808400-161863200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:161808800-161858800 Weak transcription Spleen Spleen
7 chr1:161819800-161852600 Weak transcription NHDF-Ad bronchial
8 chr1:161820600-161849200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:161823600-161858800 Weak transcription Thymus Thymus
10 chr1:161823800-161857000 Weak transcription Ovary ovary
11 chr1:161824000-161854400 Weak transcription NH-A brain
12 chr1:161824000-161859000 Weak transcription Brain Cingulate Gyrus brain
13 chr1:161824200-161854400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:161824400-161853200 Weak transcription HSMM muscle
16 chr1:161824400-161882000 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr1:161824600-161853400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:161824600-161858600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:161825200-161855000 Weak transcription Fetal Muscle Leg muscle
20 chr1:161825200-161856400 Weak transcription K562 blood
21 chr1:161825600-161863200 Weak transcription Fetal Heart heart
22 chr1:161825800-161859200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr1:161826200-161858600 Weak transcription Psoas Muscle Psoas
24 chr1:161826200-161860400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:161830400-161844200 Weak transcription Fetal Thymus thymus
26 chr1:161831000-161855000 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr1:161831800-161856400 Weak transcription Left Ventricle heart
28 chr1:161833000-161855600 Weak transcription Primary hematopoietic stem cells blood
29 chr1:161834200-161853200 Weak transcription NHLF lung
30 chr1:161834200-161859000 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:161834400-161852400 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr1:161834400-161863200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:161834600-161857400 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:161834600-161858800 Weak transcription GM12878-XiMat blood
35 chr1:161834600-161859000 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:161834600-161859000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:161835000-161856800 Weak transcription Placenta Placenta
38 chr1:161835400-161857200 Weak transcription Dnd41 blood
39 chr1:161835600-161845400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:161835800-161858800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:161836400-161853800 Weak transcription Rectal Smooth Muscle rectum
42 chr1:161836400-161856400 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr1:161836400-161857200 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr1:161836600-161856400 Weak transcription Fetal Intestine Large intestine
45 chr1:161836600-161868000 Weak transcription Fetal Kidney kidney
46 chr1:161836600-161888400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:161836800-161861000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr1:161837200-161858600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:161838400-161848800 Weak transcription Adipose Nuclei Adipose
50 chr1:161838400-161855800 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015