The 2.0 version of rSNPBase

Variant report

Variant rs4657110
Chromosome Location chr1:161798239-161798240
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161753400-161800600 Weak transcription Spleen Spleen
2 chr1:161773400-161854400 Weak transcription Small Intestine intestine
3 chr1:161780400-161798800 Strong transcription Primary monocytes fromperipheralblood blood
4 chr1:161780400-161824400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:161780600-161798800 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr1:161780600-161808200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:161780600-161823400 Weak transcription A549 lung
8 chr1:161780600-161836600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:161780800-161812400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:161780800-161823000 Weak transcription HSMMtube muscle
11 chr1:161780800-161825800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:161780800-161834000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:161781000-161823000 Weak transcription Fetal Kidney kidney
14 chr1:161781400-161801000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:161785400-161822400 Weak transcription Fetal Intestine Small intestine
16 chr1:161787400-161804600 Weak transcription NHDF-Ad bronchial
17 chr1:161787600-161809800 Weak transcription Rectal Smooth Muscle rectum
18 chr1:161787600-161821000 Weak transcription Stomach Smooth Muscle stomach
19 chr1:161789600-161798800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:161789800-161798800 Strong transcription Primary T cells from cord blood blood
21 chr1:161790200-161816000 Weak transcription NHEK skin
22 chr1:161791400-161823000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:161791600-161805200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:161791600-161812800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:161791600-161816200 Weak transcription HepG2 liver
26 chr1:161791600-161823000 Weak transcription Fetal Lung lung
27 chr1:161791800-161808200 Weak transcription Right Ventricle heart
28 chr1:161791800-161819800 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr1:161791800-161820800 Weak transcription Brain Hippocampus Middle brain
30 chr1:161791800-161822400 Weak transcription Thymus Thymus
31 chr1:161791800-161823000 Weak transcription Fetal Brain Female brain
32 chr1:161791800-161823600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr1:161791800-161842000 Weak transcription Brain Angular Gyrus brain
34 chr1:161792000-161822400 Weak transcription Aorta Aorta
35 chr1:161792000-161823200 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:161792200-161806400 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:161792200-161807800 Weak transcription Colon Smooth Muscle Colon
38 chr1:161792200-161816000 Weak transcription Brain Anterior Caudate brain
39 chr1:161792200-161816200 Weak transcription Duodenum Mucosa Duodenum
40 chr1:161792200-161816800 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr1:161792200-161821000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:161792200-161838000 Weak transcription Fetal Brain Male brain
43 chr1:161792600-161802000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr1:161792600-161806800 Weak transcription Fetal Thymus thymus
45 chr1:161792600-161808200 Weak transcription Brain Substantia Nigra brain
46 chr1:161792600-161818600 Weak transcription Ovary ovary
47 chr1:161792800-161802800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr1:161792800-161807400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:161792800-161812600 Weak transcription HUVEC blood vessel
50 chr1:161792800-161816000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015