The 2.0 version of rSNPBase

Variant report

Variant rs2271010
Chromosome Location chr1:161736473-161736474
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161733600-161737000 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr1:161733800-161737400 Active TSS A549 lung
3 chr1:161734600-161736600 Active TSS Primary T killer naive cells fromperipheralblood blood
4 chr1:161734600-161736600 Active TSS Placenta Placenta
5 chr1:161734600-161736600 Active TSS Rectal Smooth Muscle rectum
6 chr1:161734600-161736600 Active TSS Right Atrium heart
7 chr1:161734600-161736600 Active TSS NH-A brain
8 chr1:161734600-161736800 Active TSS HUES48 Cell Line embryonic stem cell
9 chr1:161734600-161736800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:161734600-161736800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:161734600-161736800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:161734600-161736800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:161734600-161736800 Active TSS Fetal Intestine Large intestine
14 chr1:161734600-161736800 Active TSS Fetal Kidney kidney
15 chr1:161734600-161736800 Active TSS Fetal Muscle Leg muscle
16 chr1:161734600-161736800 Active TSS Fetal Stomach stomach
17 chr1:161734600-161736800 Active TSS HSMM muscle
18 chr1:161734600-161736800 Active TSS HSMMtube muscle
19 chr1:161734600-161736800 Active TSS HUVEC blood vessel
20 chr1:161734600-161736800 Active TSS NHDF-Ad bronchial
21 chr1:161734600-161736800 Active TSS NHEK skin
22 chr1:161734600-161737000 Active TSS H1 Cell Line embryonic stem cell
23 chr1:161734600-161737000 Active TSS H9 Cell Line embryonic stem cell
24 chr1:161734600-161737000 Active TSS HUES6 Cell Line embryonic stem cell
25 chr1:161734600-161737000 Active TSS iPS-15b Cell Line embryonic stem cell
26 chr1:161734600-161737000 Active TSS Breast Myoepithelial Primary Cells Breast
27 chr1:161734600-161737000 Active TSS Muscle Satellite Cultured Cells --
28 chr1:161734600-161737000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:161734600-161737000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:161734600-161737000 Active TSS Aorta Aorta
31 chr1:161734600-161737000 Active TSS Pancreatic Islets Pancreatic Islet
32 chr1:161734600-161737000 Active TSS Ovary ovary
33 chr1:161734600-161737000 Active TSS Stomach Smooth Muscle stomach
34 chr1:161734600-161737000 Active TSS GM12878-XiMat blood
35 chr1:161734600-161737000 Active TSS NHLF lung
36 chr1:161734600-161737200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:161734600-161737200 Active TSS Right Ventricle heart
38 chr1:161734600-161737400 Active TSS HUES64 Cell Line embryonic stem cell
39 chr1:161734600-161737600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:161734800-161736600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:161734800-161736600 Active TSS Cortex derived primary cultured neurospheres brain
42 chr1:161734800-161736600 Active TSS Brain Anterior Caudate brain
43 chr1:161734800-161736600 Active TSS Brain Hippocampus Middle brain
44 chr1:161734800-161736600 Active TSS Colon Smooth Muscle Colon
45 chr1:161734800-161736600 Active TSS Fetal Lung lung
46 chr1:161734800-161736600 Active TSS Fetal Thymus thymus
47 chr1:161734800-161736600 Active TSS Placenta Amnion Placenta Amnion
48 chr1:161734800-161736600 Active TSS Rectal Mucosa Donor 29 rectum
49 chr1:161734800-161736600 Active TSS Osteobl bone
50 chr1:161734800-161736800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015