The 2.0 version of rSNPBase

Variant report

Variant rs4657100
Chromosome Location chr1:161738063-161738064
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161736400-161738200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
2 chr1:161736600-161738600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
3 chr1:161736800-161738600 Flanking Active TSS Liver Liver
4 chr1:161736800-161738600 Flanking Active TSS Dnd41 blood
5 chr1:161736800-161740000 Enhancers Small Intestine intestine
6 chr1:161736800-161752000 Weak transcription Lung lung
7 chr1:161736800-161754000 Weak transcription Colonic Mucosa Colon
8 chr1:161736800-161757200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:161737000-161738200 Enhancers Rectal Smooth Muscle rectum
10 chr1:161737000-161738400 Enhancers Primary B cells from peripheral blood blood
11 chr1:161737000-161738600 Enhancers Primary monocytes fromperipheralblood blood
12 chr1:161737000-161738600 Enhancers Primary T cells fromperipheralblood blood
13 chr1:161737000-161738600 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr1:161737000-161738600 Enhancers Primary mononuclear cells fromperipheralblood Blood
15 chr1:161737000-161740200 Enhancers Colon Smooth Muscle Colon
16 chr1:161737000-161740600 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr1:161737000-161741000 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr1:161737000-161743800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:161737000-161745400 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:161737000-161751600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:161737000-161752000 Weak transcription Left Ventricle heart
22 chr1:161737000-161765600 Weak transcription Aorta Aorta
23 chr1:161737200-161738200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:161737200-161738200 Enhancers Rectal Mucosa Donor 29 rectum
25 chr1:161737200-161738200 Enhancers Thymus Thymus
26 chr1:161737200-161738400 Enhancers Fetal Brain Female brain
27 chr1:161737200-161738600 Enhancers Stomach Smooth Muscle stomach
28 chr1:161737200-161739000 Weak transcription NH-A brain
29 chr1:161737200-161740800 Enhancers Primary T cells from cord blood blood
30 chr1:161737200-161741400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:161737200-161741600 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr1:161737200-161744000 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:161737200-161745000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr1:161737200-161746600 Weak transcription NHLF lung
35 chr1:161737200-161748000 Enhancers Primary T helper naive cells from peripheral blood blood
36 chr1:161737200-161751200 Weak transcription Placenta Placenta
37 chr1:161737200-161751400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:161737200-161752200 Weak transcription Psoas Muscle Psoas
39 chr1:161737200-161752600 Weak transcription Esophagus oesophagus
40 chr1:161737200-161752800 Weak transcription HSMMtube muscle
41 chr1:161737200-161761600 Weak transcription Fetal Brain Male brain
42 chr1:161737200-161761600 Weak transcription Right Ventricle heart
43 chr1:161737200-161775200 Weak transcription Fetal Stomach stomach
44 chr1:161737200-161775800 Weak transcription Stomach Mucosa stomach
45 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
46 chr1:161737400-161738200 Enhancers Primary hematopoietic stem cells blood
47 chr1:161737400-161738200 Enhancers Brain Hippocampus Middle brain
48 chr1:161737400-161738200 Enhancers HUVEC blood vessel
49 chr1:161737400-161738400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:161737400-161738400 Enhancers Adipose Nuclei Adipose

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Last update: Aug 31, 2015