The 2.0 version of rSNPBase

Variant report

Variant rs12045480
Chromosome Location chr1:161761099-161761100
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161737000-161765600 Weak transcription Aorta Aorta
2 chr1:161737200-161761600 Weak transcription Fetal Brain Male brain
3 chr1:161737200-161761600 Weak transcription Right Ventricle heart
4 chr1:161737200-161775200 Weak transcription Fetal Stomach stomach
5 chr1:161737200-161775800 Weak transcription Stomach Mucosa stomach
6 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
7 chr1:161737600-161762000 Weak transcription Fetal Lung lung
8 chr1:161737600-161764600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
10 chr1:161738600-161795600 Weak transcription Gastric stomach
11 chr1:161740400-161761800 Weak transcription Ovary ovary
12 chr1:161742400-161773000 Weak transcription Small Intestine intestine
13 chr1:161745400-161780000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:161747200-161761600 Weak transcription Thymus Thymus
15 chr1:161747200-161763000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:161747600-161773800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:161748000-161778800 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr1:161748200-161780000 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:161749000-161761600 Weak transcription Placenta Amnion Placenta Amnion
20 chr1:161749000-161777000 Strong transcription Liver Liver
21 chr1:161749200-161780000 Strong transcription Primary monocytes fromperipheralblood blood
22 chr1:161750000-161762000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr1:161750000-161768200 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr1:161750600-161774800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:161751800-161773800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:161752200-161761400 Weak transcription Colon Smooth Muscle Colon
27 chr1:161752200-161773400 Strong transcription Rectal Mucosa Donor 31 rectum
28 chr1:161752200-161780000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:161752400-161762000 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:161752400-161767800 Strong transcription Dnd41 blood
31 chr1:161752600-161762000 Weak transcription NHLF lung
32 chr1:161752600-161776000 Weak transcription Fetal Heart heart
33 chr1:161753000-161761400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:161753000-161762000 Weak transcription Brain Substantia Nigra brain
35 chr1:161753000-161771800 Weak transcription H1 Cell Line embryonic stem cell
36 chr1:161753200-161765400 Weak transcription Brain Angular Gyrus brain
37 chr1:161753200-161780000 Weak transcription Esophagus oesophagus
38 chr1:161753400-161765400 Weak transcription Lung lung
39 chr1:161753400-161800600 Weak transcription Spleen Spleen
40 chr1:161754200-161761800 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr1:161754400-161762200 Weak transcription HSMMtube muscle
42 chr1:161754600-161761600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:161755000-161761200 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr1:161755000-161761400 Weak transcription Brain Anterior Caudate brain
45 chr1:161755000-161761600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:161755000-161761600 Weak transcription Brain Cingulate Gyrus brain
47 chr1:161755000-161793600 Weak transcription Colonic Mucosa Colon
48 chr1:161755200-161761400 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr1:161755200-161761600 Weak transcription Brain Hippocampus Middle brain
50 chr1:161755200-161761800 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015