Variant report

Variant rs11589762
Chromosome Location chr1:228512156-228512157
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228503000-228512800 Strong transcription Right Ventricle heart
2 chr1:228503200-228513000 Strong transcription Primary T helper naive cells fromperipheralblood blood
3 chr1:228503400-228512400 Strong transcription Left Ventricle heart
4 chr1:228503600-228513000 Strong transcription Thymus Thymus
5 chr1:228504000-228513000 Strong transcription Brain Germinal Matrix brain
6 chr1:228504400-228512800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr1:228504400-228529600 Weak transcription Colonic Mucosa Colon
8 chr1:228504600-228513000 Strong transcription Placenta Amnion Placenta Amnion
9 chr1:228504800-228512800 Strong transcription Primary T cells from cord blood blood
10 chr1:228505400-228512800 Weak transcription Primary B cells from cord blood blood
11 chr1:228505800-228512400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:228505800-228512400 Strong transcription Fetal Lung lung
13 chr1:228505800-228513000 Strong transcription Pancreas Pancrea
14 chr1:228506000-228512800 Strong transcription Fetal Intestine Large intestine
15 chr1:228506200-228512200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:228506200-228512800 Strong transcription Primary T helper cells PMA-I stimulated --
17 chr1:228506200-228513200 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr1:228506400-228512600 Strong transcription Primary T cells fromperipheralblood blood
19 chr1:228506600-228512400 Strong transcription iPS-20b Cell Line embryonic stem cell
20 chr1:228506800-228512200 Strong transcription Gastric stomach
21 chr1:228506800-228512400 Strong transcription iPS-18 Cell Line embryonic stem cell
22 chr1:228506800-228512800 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr1:228507000-228512800 Strong transcription HSMMtube muscle
24 chr1:228507200-228512800 Strong transcription Primary T regulatory cells fromperipheralblood blood
25 chr1:228507200-228512800 Strong transcription Primary T killer naive cells fromperipheralblood blood
26 chr1:228507400-228512400 Genic enhancers Skeletal Muscle Female skeletal muscle
27 chr1:228507400-228512800 Strong transcription Primary T helper naive cells from peripheral blood blood
28 chr1:228507600-228512200 Weak transcription Brain Angular Gyrus brain
29 chr1:228507600-228512200 Strong transcription Esophagus oesophagus
30 chr1:228507800-228513400 Strong transcription Fetal Kidney kidney
31 chr1:228508000-228512200 Genic enhancers Skeletal Muscle Male skeletal muscle
32 chr1:228508000-228512400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:228508600-228512800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:228508600-228523600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:228508600-228526800 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr1:228508800-228512200 Weak transcription Fetal Brain Male brain
37 chr1:228508800-228515200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr1:228508800-228530200 Weak transcription Duodenum Mucosa Duodenum
39 chr1:228509000-228513200 Strong transcription Fetal Muscle Leg muscle
40 chr1:228509400-228514200 Weak transcription Primary B cells from peripheral blood blood
41 chr1:228509400-228521400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:228510000-228526200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:228510000-228531000 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr1:228510200-228528000 Weak transcription Fetal Thymus thymus
46 chr1:228510200-228531200 Weak transcription Hela-S3 cervix
47 chr1:228510800-228512800 ZNF genes & repeats Dnd41 blood
48 chr1:228510800-228513600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
49 chr1:228511000-228512200 Strong transcription Pancreatic Islets Pancreatic Islet
50 chr1:228511000-228512200 ZNF genes & repeats Lung lung

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