Variant report

Variant rs936884
Chromosome Location chr1:228464100-228464101
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228455400-228484800 Weak transcription A549 lung
2 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
3 chr1:228457200-228472000 Weak transcription Fetal Heart heart
4 chr1:228459800-228469600 Weak transcription HSMMtube muscle
5 chr1:228462400-228464200 Weak transcription Dnd41 blood
6 chr1:228462600-228464400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:228462800-228464200 Active TSS H9 Cell Line embryonic stem cell
8 chr1:228462800-228464200 Active TSS NHEK skin
9 chr1:228462800-228464400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:228462800-228464400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:228462800-228464400 Active TSS Duodenum Smooth Muscle Duodenum
12 chr1:228462800-228464400 Active TSS Fetal Kidney kidney
13 chr1:228462800-228464400 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
14 chr1:228462800-228464400 Bivalent Enhancer Stomach Mucosa stomach
15 chr1:228462800-228464600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:228462800-228464600 Flanking Active TSS Adipose Nuclei Adipose
17 chr1:228462800-228464600 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
18 chr1:228463000-228464200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr1:228463000-228464200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:228463000-228464200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
21 chr1:228463000-228464200 Active TSS Brain Angular Gyrus brain
22 chr1:228463000-228464200 Active TSS Ovary ovary
23 chr1:228463000-228464200 Active TSS Psoas Muscle Psoas
24 chr1:228463000-228464200 Bivalent/Poised TSS HepG2 liver
25 chr1:228463000-228464400 Active TSS HUES64 Cell Line embryonic stem cell
26 chr1:228463000-228464400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:228463000-228464400 Active TSS Primary T cells from cord blood blood
28 chr1:228463000-228464400 Active TSS Brain Cingulate Gyrus brain
29 chr1:228463000-228464400 Active TSS Brain Substantia Nigra brain
30 chr1:228463000-228464400 Active TSS Fetal Brain Female brain
31 chr1:228463000-228464400 Active TSS Right Atrium heart
32 chr1:228463000-228464400 Transcr. at gene 5' and 3' Right Ventricle heart
33 chr1:228463000-228464400 Active TSS NHDF-Ad bronchial
34 chr1:228463000-228464400 Active TSS NHLF lung
35 chr1:228463000-228464400 Active TSS Osteobl bone
36 chr1:228463000-228464600 Active TSS iPS-15b Cell Line embryonic stem cell
37 chr1:228463000-228464600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:228463000-228464600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
39 chr1:228463000-228465000 Enhancers Fetal Brain Male brain
40 chr1:228463200-228464200 Active TSS H1 Cell Line embryonic stem cell
41 chr1:228463200-228464200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:228463200-228464200 Active TSS HUES6 Cell Line embryonic stem cell
43 chr1:228463200-228464200 Active TSS Primary T killer memory cells from peripheral blood blood
44 chr1:228463200-228464200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
45 chr1:228463200-228464200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:228463200-228464200 Active TSS Aorta Aorta
47 chr1:228463200-228464200 Active TSS Gastric stomach
48 chr1:228463200-228464200 Active TSS Sigmoid Colon Sigmoid Colon
49 chr1:228463200-228464200 Active TSS K562 blood
50 chr1:228463200-228464400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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