Variant report

Variant rs61825301
Chromosome Location chr1:228504591-228504592
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228487200-228504600 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:228490800-228506800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr1:228491600-228505800 Genic enhancers Skeletal Muscle Male skeletal muscle
4 chr1:228497600-228507400 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:228497600-228508400 Weak transcription Psoas Muscle Psoas
6 chr1:228498000-228505400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:228498200-228507000 Weak transcription Fetal Kidney kidney
8 chr1:228498600-228506800 Weak transcription Fetal Heart heart
9 chr1:228498800-228505000 Weak transcription Brain Anterior Caudate brain
10 chr1:228499000-228507400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:228499800-228506800 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:228500000-228509400 Weak transcription Right Atrium heart
13 chr1:228500600-228504600 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr1:228500600-228505800 Weak transcription Fetal Lung lung
15 chr1:228500800-228504800 Weak transcription Primary T cells from cord blood blood
16 chr1:228500800-228504800 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr1:228500800-228506200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:228500800-228506200 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr1:228501000-228504800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:228501000-228507000 Weak transcription Fetal Brain Male brain
21 chr1:228501000-228507200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:228501200-228505400 Weak transcription Dnd41 blood
23 chr1:228501200-228506800 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr1:228501200-228506800 Weak transcription Ovary ovary
25 chr1:228501200-228507000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr1:228501400-228506800 Weak transcription Primary hematopoietic stem cells blood
27 chr1:228501600-228504800 Weak transcription H1 Cell Line embryonic stem cell
28 chr1:228502000-228505200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:228502000-228506800 Weak transcription Esophagus oesophagus
30 chr1:228502000-228507600 Strong transcription Fetal Intestine Small intestine
31 chr1:228502200-228506400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:228502200-228507000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:228502200-228507000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:228502600-228506400 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:228502800-228507200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:228502800-228507200 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:228502800-228511200 Strong transcription Fetal Stomach stomach
38 chr1:228503000-228512800 Strong transcription Right Ventricle heart
39 chr1:228503200-228505000 Enhancers Placenta Placenta
40 chr1:228503200-228513000 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:228503400-228512400 Strong transcription Left Ventricle heart
42 chr1:228503600-228505800 Weak transcription Fetal Muscle Trunk muscle
43 chr1:228503600-228507000 Weak transcription HSMMtube muscle
44 chr1:228503600-228509200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:228503600-228511000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:228503600-228511200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:228503600-228511600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:228503600-228513000 Strong transcription Thymus Thymus
49 chr1:228503800-228505000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:228503800-228507400 Strong transcription Skeletal Muscle Female skeletal muscle

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