The 2.0 version of rSNPBase

Variant report

Variant rs535329
Chromosome Location chr1:228459109-228459110
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228434800-228460000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:228434800-228462400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:228435200-228462800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:228435600-228462600 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:228443600-228462800 Weak transcription Fetal Kidney kidney
6 chr1:228444000-228461400 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:228444200-228461600 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr1:228444800-228462800 Weak transcription Fetal Thymus thymus
9 chr1:228445000-228462200 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr1:228445000-228462400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:228445000-228462800 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:228445000-228463200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:228447600-228463000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:228447800-228460600 Weak transcription Pancreas Pancrea
15 chr1:228447800-228461200 Weak transcription Gastric stomach
16 chr1:228447800-228462800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:228447800-228463000 Weak transcription Psoas Muscle Psoas
18 chr1:228449000-228462600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:228449200-228459400 Weak transcription Thymus Thymus
20 chr1:228449200-228462800 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:228449800-228459800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:228449800-228462600 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr1:228450000-228462800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:228450000-228462800 Weak transcription Brain Anterior Caudate brain
25 chr1:228450000-228463000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:228450200-228462000 Weak transcription Fetal Lung lung
27 chr1:228450600-228460200 Weak transcription Fetal Brain Female brain
28 chr1:228452200-228459600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:228452400-228463000 Weak transcription Primary hematopoietic stem cells blood
30 chr1:228452800-228460000 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr1:228453400-228462600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:228453600-228462400 Weak transcription Colon Smooth Muscle Colon
33 chr1:228453600-228462800 Weak transcription Colonic Mucosa Colon
34 chr1:228454200-228460400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:228454200-228462400 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr1:228454200-228462600 Weak transcription Adipose Nuclei Adipose
37 chr1:228455400-228484800 Weak transcription A549 lung
38 chr1:228455600-228462400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:228456000-228459400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:228456000-228462600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:228456200-228459400 Weak transcription Dnd41 blood
42 chr1:228456200-228462200 Weak transcription Placenta Amnion Placenta Amnion
43 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
44 chr1:228456600-228459400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:228456600-228461400 Weak transcription Fetal Intestine Large intestine
46 chr1:228456600-228463200 Weak transcription Aorta Aorta
47 chr1:228456800-228459400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:228456800-228459400 Weak transcription Fetal Intestine Small intestine
49 chr1:228456800-228459600 Weak transcription Lung lung
50 chr1:228456800-228462600 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015