The 2.0 version of rSNPBase

Variant report

Variant rs1757140
Chromosome Location chr1:228421967-228421968
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228402200-228425800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:228402200-228428800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:228403000-228428200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:228413000-228425600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:228413000-228426000 Weak transcription Right Atrium heart
6 chr1:228413000-228428400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:228413000-228428800 Weak transcription Gastric stomach
8 chr1:228413200-228422400 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:228413200-228424400 Weak transcription Brain Anterior Caudate brain
10 chr1:228413200-228426200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:228413400-228426000 Weak transcription Fetal Brain Male brain
12 chr1:228413600-228422200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr1:228413600-228428800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:228413800-228428600 Weak transcription Pancreas Pancrea
15 chr1:228413800-228429000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:228414400-228426000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:228414400-228426200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:228414400-228430400 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:228415200-228426000 Weak transcription Spleen Spleen
20 chr1:228415800-228426000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr1:228416200-228424400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:228416200-228426000 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:228416400-228424200 Weak transcription Fetal Muscle Trunk muscle
24 chr1:228416600-228426000 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:228416800-228424600 Weak transcription Fetal Thymus thymus
26 chr1:228416800-228426000 Weak transcription H1 Cell Line embryonic stem cell
27 chr1:228417000-228424400 Weak transcription Fetal Brain Female brain
28 chr1:228417000-228426000 Weak transcription HSMM muscle
29 chr1:228417200-228433000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:228418000-228426000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr1:228418400-228436000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:228419600-228429600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:228419800-228424600 ZNF genes & repeats Primary T cells from cord blood blood
34 chr1:228420200-228426000 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr1:228420400-228422400 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr1:228420400-228425400 Weak transcription Right Ventricle heart
37 chr1:228420400-228425600 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr1:228420400-228426000 Weak transcription Fetal Kidney kidney
39 chr1:228420400-228426200 Weak transcription HSMMtube muscle
40 chr1:228420600-228424400 Weak transcription Brain Germinal Matrix brain
41 chr1:228420600-228424400 Weak transcription Fetal Muscle Leg muscle
42 chr1:228420800-228422000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:228420800-228422400 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr1:228420800-228423200 Weak transcription Aorta Aorta
45 chr1:228420800-228424200 Weak transcription Fetal Lung lung
46 chr1:228420800-228424200 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:228420800-228424400 Weak transcription Fetal Intestine Small intestine
48 chr1:228420800-228424400 Weak transcription Left Ventricle heart
49 chr1:228420800-228424400 Weak transcription Thymus Thymus
50 chr1:228420800-228425200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015