Variant report

Variant rs3121191
Chromosome Location chr1:228400653-228400654
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228395800-228405200 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
2 chr1:228397200-228401000 Enhancers Fetal Heart heart
3 chr1:228397800-228400800 Weak transcription HSMMtube muscle
4 chr1:228398800-228402000 Active TSS Psoas Muscle Psoas
5 chr1:228399600-228400800 Genic enhancers Left Ventricle heart
6 chr1:228399600-228400800 Enhancers Spleen Spleen
7 chr1:228400000-228401800 Active TSS Thymus Thymus
8 chr1:228400000-228402400 Active TSS H9 Cell Line embryonic stem cell
9 chr1:228400000-228402600 Active TSS HUES64 Cell Line embryonic stem cell
10 chr1:228400200-228400800 Active TSS Primary T helper naive cells fromperipheralblood blood
11 chr1:228400200-228400800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr1:228400200-228400800 Enhancers Pancreas Pancrea
13 chr1:228400200-228400800 Enhancers Placenta Amnion Placenta Amnion
14 chr1:228400200-228401000 Bivalent Enhancer Placenta Placenta
15 chr1:228400200-228401200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
16 chr1:228400200-228401200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:228400200-228401400 Flanking Active TSS Primary B cells from cord blood blood
18 chr1:228400200-228401400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:228400200-228401800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:228400200-228401800 Active TSS Brain Angular Gyrus brain
21 chr1:228400200-228402200 Active TSS iPS-18 Cell Line embryonic stem cell
22 chr1:228400200-228402600 Active TSS iPS-20b Cell Line embryonic stem cell
23 chr1:228400400-228400800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
24 chr1:228400400-228400800 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
25 chr1:228400400-228400800 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr1:228400400-228400800 Bivalent Enhancer Muscle Satellite Cultured Cells --
27 chr1:228400400-228400800 Enhancers Lung lung
28 chr1:228400400-228400800 Enhancers Rectal Mucosa Donor 29 rectum
29 chr1:228400400-228400800 Enhancers A549 lung
30 chr1:228400400-228400800 Enhancers HMEC breast
31 chr1:228400400-228400800 Active TSS HSMM muscle
32 chr1:228400400-228400800 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
33 chr1:228400400-228401000 Enhancers Sigmoid Colon Sigmoid Colon
34 chr1:228400400-228401200 Enhancers Liver Liver
35 chr1:228400400-228401400 Flanking Active TSS Primary T cells fromperipheralblood blood
36 chr1:228400400-228401400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
37 chr1:228400400-228401400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:228400400-228401400 Bivalent/Poised TSS Brain Hippocampus Middle brain
39 chr1:228400400-228401400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
40 chr1:228400400-228401600 Active TSS Primary T helper 17 cells PMA-I stimulated --
41 chr1:228400400-228401800 Active TSS Primary T helper naive cells from peripheral blood blood
42 chr1:228400400-228401800 Active TSS Primary T killer naive cells fromperipheralblood blood
43 chr1:228400400-228402000 Active TSS ES-WA7 Cell Line embryonic stem cell
44 chr1:228400400-228402000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:228400400-228402000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:228400400-228402000 Active TSS Fetal Kidney kidney
47 chr1:228400400-228402000 Active TSS NHEK skin
48 chr1:228400400-228402200 Active TSS iPS-15b Cell Line embryonic stem cell
49 chr1:228400400-228402400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:228400400-228403200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin

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