Variant report

Variant rs1757149
Chromosome Location chr1:228413635-228413636
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228402200-228415200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:228402200-228425800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:228402200-228428800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr1:228402600-228418000 Strong transcription Primary T cells from cord blood blood
5 chr1:228403000-228428200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:228403200-228418000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:228403400-228415000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:228410000-228416600 Strong transcription H9 Cell Line embryonic stem cell
9 chr1:228410200-228414800 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
10 chr1:228410400-228415600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:228410600-228416400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:228410800-228416800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:228411000-228415000 Weak transcription Small Intestine intestine
14 chr1:228411600-228413800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:228411600-228413800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:228411600-228416000 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr1:228411600-228416800 Strong transcription Dnd41 blood
18 chr1:228411800-228413800 ZNF genes & repeats Pancreas Pancrea
19 chr1:228411800-228414200 ZNF genes & repeats Lung lung
20 chr1:228411800-228414200 ZNF genes & repeats Spleen Spleen
21 chr1:228411800-228415000 Strong transcription Primary T cells fromperipheralblood blood
22 chr1:228411800-228416200 Strong transcription iPS-18 Cell Line embryonic stem cell
23 chr1:228411800-228416400 Weak transcription K562 blood
24 chr1:228411800-228417000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:228411800-228420200 Strong transcription HUES48 Cell Line embryonic stem cell
26 chr1:228412000-228413800 ZNF genes & repeats Placenta Placenta
27 chr1:228412000-228414400 Strong transcription Placenta Amnion Placenta Amnion
28 chr1:228412000-228416800 Strong transcription H1 Cell Line embryonic stem cell
29 chr1:228412200-228414000 ZNF genes & repeats A549 lung
30 chr1:228412400-228420400 Strong transcription iPS-20b Cell Line embryonic stem cell
31 chr1:228412600-228415200 Genic enhancers Right Ventricle heart
32 chr1:228412600-228420800 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr1:228412800-228414000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr1:228412800-228414400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:228412800-228414400 Strong transcription Fetal Intestine Large intestine
36 chr1:228412800-228415200 Weak transcription Colonic Mucosa Colon
37 chr1:228412800-228416800 Strong transcription Fetal Thymus thymus
38 chr1:228413000-228414000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:228413000-228414800 Weak transcription Duodenum Mucosa Duodenum
40 chr1:228413000-228415200 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:228413000-228416200 Strong transcription Thymus Thymus
42 chr1:228413000-228416800 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:228413000-228425600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr1:228413000-228426000 Weak transcription Right Atrium heart
45 chr1:228413000-228428400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:228413000-228428800 Weak transcription Gastric stomach
47 chr1:228413200-228413800 Genic enhancers Skeletal Muscle Female skeletal muscle
48 chr1:228413200-228414000 Strong transcription Left Ventricle heart
49 chr1:228413200-228414200 Strong transcription Primary hematopoietic stem cells blood
50 chr1:228413200-228414200 Strong transcription Primary T regulatory cells fromperipheralblood blood

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