Variant report

Variant rs1757152
Chromosome Location chr1:228412308-228412309
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228401400-228412600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:228402000-228412600 Weak transcription Fetal Kidney kidney
3 chr1:228402200-228412400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:228402200-228412600 Weak transcription Primary B cells from cord blood blood
5 chr1:228402200-228415200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:228402200-228425800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:228402200-228428800 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:228402400-228412400 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:228402400-228412600 Weak transcription HMEC breast
10 chr1:228402600-228418000 Strong transcription Primary T cells from cord blood blood
11 chr1:228402800-228412600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr1:228403000-228428200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:228403200-228418000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:228403400-228415000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:228404200-228412600 Weak transcription Fetal Brain Male brain
16 chr1:228408600-228412400 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr1:228410000-228416600 Strong transcription H9 Cell Line embryonic stem cell
18 chr1:228410200-228413600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:228410200-228414800 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
20 chr1:228410400-228412400 Strong transcription Fetal Muscle Trunk muscle
21 chr1:228410400-228412600 Strong transcription Fetal Lung lung
22 chr1:228410400-228412800 ZNF genes & repeats Aorta Aorta
23 chr1:228410400-228415600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:228410600-228416400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:228410800-228413000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
26 chr1:228410800-228416800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:228411000-228413200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
28 chr1:228411000-228415000 Weak transcription Small Intestine intestine
29 chr1:228411400-228413400 ZNF genes & repeats Fetal Intestine Small intestine
30 chr1:228411400-228413600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:228411600-228413200 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
32 chr1:228411600-228413600 ZNF genes & repeats Fetal Stomach stomach
33 chr1:228411600-228413800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:228411600-228413800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:228411600-228416000 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr1:228411600-228416800 Strong transcription Dnd41 blood
37 chr1:228411800-228412800 ZNF genes & repeats Fetal Intestine Large intestine
38 chr1:228411800-228412800 ZNF genes & repeats Fetal Thymus thymus
39 chr1:228411800-228413000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
40 chr1:228411800-228413000 ZNF genes & repeats Gastric stomach
41 chr1:228411800-228413200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:228411800-228413200 ZNF genes & repeats Primary hematopoietic stem cells blood
43 chr1:228411800-228413200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
44 chr1:228411800-228413200 ZNF genes & repeats Esophagus oesophagus
45 chr1:228411800-228413200 ZNF genes & repeats Ovary ovary
46 chr1:228411800-228413400 ZNF genes & repeats Primary B cells from peripheral blood blood
47 chr1:228411800-228413400 ZNF genes & repeats Brain Germinal Matrix brain
48 chr1:228411800-228413600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:228411800-228413600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:228411800-228413800 ZNF genes & repeats Pancreas Pancrea

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