The 2.0 version of rSNPBase

Variant report

Variant rs1757141
Chromosome Location chr1:228420604-228420605
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228402200-228425800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:228402200-228428800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:228403000-228428200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:228412600-228420800 Strong transcription HUES64 Cell Line embryonic stem cell
5 chr1:228413000-228425600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:228413000-228426000 Weak transcription Right Atrium heart
7 chr1:228413000-228428400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr1:228413000-228428800 Weak transcription Gastric stomach
9 chr1:228413200-228422400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:228413200-228424400 Weak transcription Brain Anterior Caudate brain
11 chr1:228413200-228426200 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr1:228413400-228421000 Weak transcription Primary B cells from peripheral blood blood
13 chr1:228413400-228426000 Weak transcription Fetal Brain Male brain
14 chr1:228413600-228422200 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:228413600-228428800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:228413800-228428600 Weak transcription Pancreas Pancrea
17 chr1:228413800-228429000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:228414400-228426000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:228414400-228426200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:228414400-228430400 Weak transcription Placenta Amnion Placenta Amnion
21 chr1:228415000-228421600 Weak transcription Primary T cells fromperipheralblood blood
22 chr1:228415200-228426000 Weak transcription Spleen Spleen
23 chr1:228415800-228426000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:228416200-228424400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:228416200-228426000 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr1:228416400-228424200 Weak transcription Fetal Muscle Trunk muscle
27 chr1:228416600-228426000 Weak transcription H9 Cell Line embryonic stem cell
28 chr1:228416800-228424600 Weak transcription Fetal Thymus thymus
29 chr1:228416800-228426000 Weak transcription H1 Cell Line embryonic stem cell
30 chr1:228417000-228424400 Weak transcription Fetal Brain Female brain
31 chr1:228417000-228426000 Weak transcription HSMM muscle
32 chr1:228417200-228433000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:228417400-228421000 Weak transcription HMEC breast
34 chr1:228417800-228420800 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:228418000-228420800 Strong transcription Fetal Lung lung
36 chr1:228418000-228426000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:228418200-228420800 Genic enhancers Skeletal Muscle Male skeletal muscle
38 chr1:228418400-228436000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:228419400-228420800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:228419400-228420800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:228419400-228421200 Strong transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:228419400-228421800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:228419600-228421600 ZNF genes & repeats A549 lung
44 chr1:228419600-228421800 Strong transcription Primary T helper cells PMA-I stimulated --
45 chr1:228419600-228429600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:228419800-228420800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:228419800-228421000 ZNF genes & repeats Primary hematopoietic stem cells blood
48 chr1:228419800-228421000 Strong transcription Fetal Heart heart
49 chr1:228419800-228421000 Strong transcription Hela-S3 cervix
50 chr1:228419800-228421200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015