The 2.0 version of rSNPBase

Variant report

Variant rs2776845
Chromosome Location chr1:228416994-228416995
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228402200-228425800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:228402200-228428800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:228402600-228418000 Strong transcription Primary T cells from cord blood blood
4 chr1:228403000-228428200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:228403200-228418000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:228411800-228417000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:228411800-228420200 Strong transcription HUES48 Cell Line embryonic stem cell
8 chr1:228412400-228420400 Strong transcription iPS-20b Cell Line embryonic stem cell
9 chr1:228412600-228420800 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr1:228413000-228425600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:228413000-228426000 Weak transcription Right Atrium heart
12 chr1:228413000-228428400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:228413000-228428800 Weak transcription Gastric stomach
14 chr1:228413200-228417000 Strong transcription HUES6 Cell Line embryonic stem cell
15 chr1:228413200-228417000 Strong transcription Fetal Brain Female brain
16 chr1:228413200-228418200 Weak transcription Fetal Kidney kidney
17 chr1:228413200-228420200 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr1:228413200-228422400 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:228413200-228424400 Weak transcription Brain Anterior Caudate brain
20 chr1:228413200-228426200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:228413400-228417200 Strong transcription Fetal Lung lung
22 chr1:228413400-228421000 Weak transcription Primary B cells from peripheral blood blood
23 chr1:228413400-228426000 Weak transcription Fetal Brain Male brain
24 chr1:228413600-228417200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:228413600-228418400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:228413600-228419200 Weak transcription HSMMtube muscle
27 chr1:228413600-228420400 Weak transcription Primary B cells from cord blood blood
28 chr1:228413600-228422200 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr1:228413600-228428800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:228413800-228417800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:228413800-228428600 Weak transcription Pancreas Pancrea
32 chr1:228413800-228429000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:228414000-228419600 Weak transcription A549 lung
34 chr1:228414000-228419800 Weak transcription Fetal Heart heart
35 chr1:228414200-228417800 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr1:228414200-228418800 Weak transcription Primary hematopoietic stem cells blood
37 chr1:228414400-228417200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:228414400-228420200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:228414400-228420200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:228414400-228426000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:228414400-228426200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:228414400-228430400 Weak transcription Placenta Amnion Placenta Amnion
43 chr1:228414600-228417200 Enhancers Primary monocytes fromperipheralblood blood
44 chr1:228415000-228417000 Enhancers NHDF-Ad bronchial
45 chr1:228415000-228421600 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:228415200-228417000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr1:228415200-228417000 Enhancers Muscle Satellite Cultured Cells --
48 chr1:228415200-228417200 Enhancers NHEK skin
49 chr1:228415200-228417400 Enhancers HMEC breast
50 chr1:228415200-228426000 Weak transcription Spleen Spleen

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015