Variant report

Variant rs545313
Chromosome Location chr1:228454584-228454585
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228434600-228455400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:228434800-228460000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:228434800-228462400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr1:228435200-228462800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:228435600-228462600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:228437000-228455600 Weak transcription Hela-S3 cervix
7 chr1:228438400-228455600 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:228443200-228454800 Strong transcription Left Ventricle heart
9 chr1:228443600-228462800 Weak transcription Fetal Kidney kidney
10 chr1:228444000-228461400 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr1:228444200-228461600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr1:228444800-228462800 Weak transcription Fetal Thymus thymus
13 chr1:228445000-228455800 Weak transcription H1 Cell Line embryonic stem cell
14 chr1:228445000-228456400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:228445000-228462200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr1:228445000-228462400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:228445000-228462800 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:228445000-228463200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr1:228447400-228455800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:228447400-228455800 Weak transcription Brain Germinal Matrix brain
21 chr1:228447600-228455800 Weak transcription Lung lung
22 chr1:228447600-228455800 Weak transcription Spleen Spleen
23 chr1:228447600-228463000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr1:228447800-228454600 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:228447800-228455600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:228447800-228455800 Weak transcription Esophagus oesophagus
27 chr1:228447800-228460600 Weak transcription Pancreas Pancrea
28 chr1:228447800-228461200 Weak transcription Gastric stomach
29 chr1:228447800-228462800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:228447800-228463000 Weak transcription Psoas Muscle Psoas
31 chr1:228448000-228454600 Weak transcription HSMMtube muscle
32 chr1:228448000-228455600 Weak transcription Ovary ovary
33 chr1:228448200-228455800 Weak transcription Stomach Smooth Muscle stomach
34 chr1:228449000-228462600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:228449200-228459400 Weak transcription Thymus Thymus
36 chr1:228449200-228462800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:228449400-228455600 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:228449800-228455600 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr1:228449800-228459800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:228449800-228462600 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:228450000-228455000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:228450000-228462800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:228450000-228462800 Weak transcription Brain Anterior Caudate brain
44 chr1:228450000-228463000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:228450200-228462000 Weak transcription Fetal Lung lung
46 chr1:228450400-228455600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:228450600-228460200 Weak transcription Fetal Brain Female brain
48 chr1:228451600-228455800 Weak transcription Fetal Intestine Large intestine
49 chr1:228452000-228455800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:228452200-228455000 Strong transcription Skeletal Muscle Female skeletal muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links