Variant report

Variant rs4653936
Chromosome Location chr1:228474840-228474841
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228455400-228484800 Weak transcription A549 lung
2 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
3 chr1:228463800-228481400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:228464200-228478000 Strong transcription Dnd41 blood
5 chr1:228464200-228491600 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr1:228464400-228478400 Strong transcription Thymus Thymus
7 chr1:228464400-228479600 Weak transcription Right Atrium heart
8 chr1:228464400-228481400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:228464400-228482000 Weak transcription Fetal Kidney kidney
10 chr1:228464400-228489200 Strong transcription Left Ventricle heart
11 chr1:228464600-228475400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:228464600-228476800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:228464600-228481400 Weak transcription Primary hematopoietic stem cells blood
14 chr1:228464600-228483200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:228464600-228483200 Strong transcription Fetal Intestine Small intestine
16 chr1:228464600-228487000 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr1:228464800-228476800 Strong transcription HUES6 Cell Line embryonic stem cell
18 chr1:228464800-228477400 Strong transcription Primary T cells from cord blood blood
19 chr1:228465000-228476000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:228465000-228483600 Strong transcription Right Ventricle heart
21 chr1:228465000-228498000 Weak transcription Fetal Brain Male brain
22 chr1:228465200-228483400 Weak transcription Colonic Mucosa Colon
23 chr1:228465200-228483400 Strong transcription Fetal Stomach stomach
24 chr1:228465600-228483400 Strong transcription Fetal Brain Female brain
25 chr1:228465800-228476600 Strong transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:228466200-228475800 Strong transcription Fetal Intestine Large intestine
27 chr1:228466200-228477200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:228467200-228484200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:228468400-228482600 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr1:228469200-228479800 Weak transcription Pancreas Pancrea
31 chr1:228471200-228484200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:228471600-228475600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:228471600-228481400 Weak transcription Aorta Aorta
34 chr1:228471800-228475400 Weak transcription Adipose Nuclei Adipose
35 chr1:228471800-228476000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:228471800-228483400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr1:228471800-228489200 Weak transcription Duodenum Mucosa Duodenum
38 chr1:228472000-228475400 Weak transcription Fetal Lung lung
39 chr1:228472000-228477200 Strong transcription Fetal Muscle Trunk muscle
40 chr1:228472000-228482000 Strong transcription Skeletal Muscle Female skeletal muscle
41 chr1:228472200-228476200 Weak transcription Primary T cells fromperipheralblood blood
42 chr1:228472200-228476600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:228472200-228481600 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr1:228472200-228484800 Strong transcription Fetal Muscle Leg muscle
45 chr1:228472200-228490000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:228472400-228481200 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr1:228472400-228486000 Weak transcription H9 Cell Line embryonic stem cell
48 chr1:228472400-228486200 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr1:228472600-228475200 Weak transcription HSMMtube muscle
50 chr1:228472600-228481400 Weak transcription Fetal Thymus thymus

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