Variant report

Variant rs11582927
Chromosome Location chr1:228546487-228546488
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:228511400-228552400 Weak transcription Psoas Muscle Psoas
3 chr1:228527600-228546600 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr1:228527600-228562400 Weak transcription Brain Anterior Caudate brain
5 chr1:228527800-228555800 Weak transcription Gastric stomach
6 chr1:228530000-228547200 Weak transcription Pancreas Pancrea
7 chr1:228531200-228549600 Weak transcription Esophagus oesophagus
8 chr1:228531200-228551200 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr1:228532400-228555200 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:228532400-228562400 Weak transcription Fetal Lung lung
11 chr1:228533200-228548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:228535200-228554200 Weak transcription Right Atrium heart
13 chr1:228537000-228554800 Weak transcription Fetal Intestine Large intestine
14 chr1:228539400-228556000 Genic enhancers Skeletal Muscle Male skeletal muscle
15 chr1:228539600-228548200 Weak transcription Ovary ovary
16 chr1:228540400-228566200 Genic enhancers Skeletal Muscle Female skeletal muscle
17 chr1:228541000-228565200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:228541000-228565400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:228541400-228562000 Weak transcription Brain Germinal Matrix brain
20 chr1:228541600-228562400 Weak transcription Fetal Brain Female brain
21 chr1:228541600-228565800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:228541800-228559800 Weak transcription Lung lung
23 chr1:228542200-228548200 Weak transcription Fetal Intestine Small intestine
24 chr1:228542800-228549800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:228542800-228555000 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr1:228543400-228546600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:228544600-228549600 Weak transcription Primary T cells from cord blood blood
28 chr1:228545400-228546800 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr1:228545800-228548600 Strong transcription Fetal Muscle Trunk muscle
30 chr1:228545800-228562400 Weak transcription HSMMtube muscle
31 chr1:228546000-228546600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:228546000-228547200 Weak transcription Right Ventricle heart
33 chr1:228546000-228549400 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr1:228546000-228553600 Weak transcription Left Ventricle heart
35 chr1:228546200-228546800 Bivalent Enhancer HepG2 liver
36 chr1:228546200-228547200 ZNF genes & repeats Fetal Stomach stomach
37 chr1:228546400-228546800 ZNF genes & repeats Fetal Muscle Leg muscle
38 chr1:228546400-228547000 Enhancers H1 Cell Line embryonic stem cell
39 chr1:228546400-228547000 Enhancers Primary T cells fromperipheralblood blood
40 chr1:228546400-228548000 Enhancers Spleen Spleen
41 chr1:228546400-228550000 Enhancers Fetal Heart heart

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