Variant report

Variant rs1629294
Chromosome Location chr1:228415501-228415502
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228402200-228425800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:228402200-228428800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:228402600-228418000 Strong transcription Primary T cells from cord blood blood
4 chr1:228403000-228428200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:228403200-228418000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:228410000-228416600 Strong transcription H9 Cell Line embryonic stem cell
7 chr1:228410400-228415600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:228410600-228416400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:228410800-228416800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:228411600-228416000 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr1:228411600-228416800 Strong transcription Dnd41 blood
12 chr1:228411800-228416200 Strong transcription iPS-18 Cell Line embryonic stem cell
13 chr1:228411800-228416400 Weak transcription K562 blood
14 chr1:228411800-228417000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:228411800-228420200 Strong transcription HUES48 Cell Line embryonic stem cell
16 chr1:228412000-228416800 Strong transcription H1 Cell Line embryonic stem cell
17 chr1:228412400-228420400 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr1:228412600-228420800 Strong transcription HUES64 Cell Line embryonic stem cell
19 chr1:228412800-228416800 Strong transcription Fetal Thymus thymus
20 chr1:228413000-228416200 Strong transcription Thymus Thymus
21 chr1:228413000-228416800 Strong transcription Primary T helper naive cells fromperipheralblood blood
22 chr1:228413000-228425600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:228413000-228426000 Weak transcription Right Atrium heart
24 chr1:228413000-228428400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:228413000-228428800 Weak transcription Gastric stomach
26 chr1:228413200-228417000 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr1:228413200-228417000 Strong transcription Fetal Brain Female brain
28 chr1:228413200-228418200 Weak transcription Fetal Kidney kidney
29 chr1:228413200-228420200 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr1:228413200-228422400 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:228413200-228424400 Weak transcription Brain Anterior Caudate brain
32 chr1:228413200-228426200 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr1:228413400-228416200 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr1:228413400-228416600 Strong transcription Brain Germinal Matrix brain
35 chr1:228413400-228417200 Strong transcription Fetal Lung lung
36 chr1:228413400-228421000 Weak transcription Primary B cells from peripheral blood blood
37 chr1:228413400-228426000 Weak transcription Fetal Brain Male brain
38 chr1:228413600-228416200 Strong transcription Fetal Muscle Leg muscle
39 chr1:228413600-228416200 Strong transcription Fetal Stomach stomach
40 chr1:228413600-228417200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:228413600-228418400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:228413600-228419200 Weak transcription HSMMtube muscle
43 chr1:228413600-228420400 Weak transcription Primary B cells from cord blood blood
44 chr1:228413600-228422200 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:228413600-228428800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr1:228413800-228417800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:228413800-228428600 Weak transcription Pancreas Pancrea
48 chr1:228413800-228429000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:228414000-228415600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:228414000-228415800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell

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