Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11012697	0.91[ASN][1000 genomes]
rs11012698	0.91[ASN][1000 genomes]
rs11591285	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11592490	0.82[EUR][1000 genomes]
rs11592821	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11592976	0.82[EUR][1000 genomes]
rs11593346	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11593992	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11594786	1.00[EUR][1000 genomes]
rs11595095	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11595687	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11597809	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12098603	0.86[ASN][1000 genomes]
rs12246522	0.91[ASN][1000 genomes]
rs59897829	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60417388	1.00[EUR][1000 genomes]
rs60438627	0.92[ASN][1000 genomes]
rs6482180	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs66491474	1.00[EUR][1000 genomes]
rs66585462	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66850655	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs66880231	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs66906877	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs67332292	0.82[EUR][1000 genomes]
rs68153488	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7068359	1.00[CEU][hapmap]
rs7076249	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs72794816	1.00[EUR][1000 genomes]
rs7912095	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530148	chr10:21065080-21724565	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21697600-21706200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:21699800-21707600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:21701400-21707600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:21701600-21702000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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