Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21690682..21692820-chr10:21708808..21711419,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10508638	0.81[EUR][1000 genomes]
rs10828243	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11012697	0.89[ASN][1000 genomes]
rs11012698	0.89[ASN][1000 genomes]
rs11591285	0.89[ASN][1000 genomes]
rs11593346	0.83[ASN][1000 genomes]
rs11595095	0.83[ASN][1000 genomes]
rs11595127	0.86[ASN][1000 genomes]
rs11595687	0.89[ASN][1000 genomes]
rs11596452	0.82[EUR][1000 genomes]
rs11597809	0.81[ASN][1000 genomes]
rs12246522	0.89[ASN][1000 genomes]
rs12248483	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12761415	0.88[EUR][1000 genomes]
rs12767504	0.82[EUR][1000 genomes]
rs12767955	0.84[EUR][1000 genomes]
rs12768155	0.88[EUR][1000 genomes]
rs12769344	0.88[EUR][1000 genomes]
rs12770588	0.86[EUR][1000 genomes]
rs12775103	0.88[EUR][1000 genomes]
rs12775448	0.88[EUR][1000 genomes]
rs12776687	0.82[EUR][1000 genomes]
rs12781438	0.83[EUR][1000 genomes]
rs34017213	0.82[EUR][1000 genomes]
rs34119904	0.84[EUR][1000 genomes]
rs6482180	0.89[ASN][1000 genomes]
rs6482181	0.88[CEU][hapmap]
rs66585462	0.89[ASN][1000 genomes]
rs67206878	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs68153488	0.83[ASN][1000 genomes]
rs7070904	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7912095	0.94[ASN][1000 genomes]
rs7922464	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs959652	0.94[CEU][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530148	chr10:21065080-21724565	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21706800-21710200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr10:21707200-21716600	Weak transcription	A549	lung
3	chr10:21707400-21710800	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr10:21707400-21713400	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr10:21707400-21716800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr10:21707800-21710800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr10:21708000-21712200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr10:21708400-21709800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr10:21708400-21709800	Weak transcription	NHEK	skin
10	chr10:21708400-21712800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr10:21708400-21714000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr10:21708600-21709800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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