Variant report

Variant	rs12767955
Chromosome Location	chr10:21726975-21726976
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21709922..21712770-chr10:21723710..21728356,4	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10508638	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012712	0.89[EUR][1000 genomes]
rs11012714	0.92[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs11012718	0.92[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs11596452	0.84[EUR][1000 genomes]
rs12098603	0.84[EUR][1000 genomes]
rs12761415	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12763166	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12764850	0.80[EUR][1000 genomes]
rs12767504	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12768155	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12769344	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12770245	0.96[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12770588	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12771156	0.80[EUR][1000 genomes]
rs12775103	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12775112	0.91[EUR][1000 genomes]
rs12775448	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12776518	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12780653	0.80[EUR][1000 genomes]
rs12781438	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12782732	0.80[EUR][1000 genomes]
rs12783571	0.80[EUR][1000 genomes]
rs12783805	0.92[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs1416903	0.80[EUR][1000 genomes]
rs34119904	0.83[EUR][1000 genomes]
rs35097657	0.81[EUR][1000 genomes]
rs35156049	0.81[EUR][1000 genomes]
rs35708372	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61850011	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61850014	0.89[EUR][1000 genomes]
rs71491182	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs985519	0.80[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21725400-21730200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:21726800-21727200	Weak transcription	Placenta	Placenta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links