Variant report

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10047291	0.81[EUR][1000 genomes]
rs10082390	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10508638	0.86[EUR][1000 genomes]
rs11012712	0.90[EUR][1000 genomes]
rs11012714	0.91[EUR][1000 genomes]
rs11012716	0.82[EUR][1000 genomes]
rs11012717	0.82[EUR][1000 genomes]
rs11012718	0.90[EUR][1000 genomes]
rs11592821	0.84[ASN][1000 genomes]
rs11593992	0.84[ASN][1000 genomes]
rs11594201	0.82[EUR][1000 genomes]
rs11594724	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11594786	0.87[ASN][1000 genomes]
rs11596452	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12098603	0.84[EUR][1000 genomes]
rs12763166	0.82[EUR][1000 genomes]
rs12767504	0.84[EUR][1000 genomes]
rs12767955	0.83[EUR][1000 genomes]
rs12770245	0.91[EUR][1000 genomes]
rs12775112	0.91[EUR][1000 genomes]
rs12776518	0.87[EUR][1000 genomes]
rs12781438	0.81[EUR][1000 genomes]
rs12783805	0.91[EUR][1000 genomes]
rs16921815	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34449603	0.81[EUR][1000 genomes]
rs35708372	0.91[EUR][1000 genomes]
rs58747541	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59897829	0.84[ASN][1000 genomes]
rs60417388	0.87[ASN][1000 genomes]
rs61850011	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61850014	0.90[EUR][1000 genomes]
rs66850655	0.84[ASN][1000 genomes]
rs66880231	0.84[ASN][1000 genomes]
rs66906877	0.84[ASN][1000 genomes]
rs7080252	0.81[EUR][1000 genomes]
rs7098776	0.82[EUR][1000 genomes]
rs71491182	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825284	chr10:21739527-21847437	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
2	nsv825285	chr10:21742026-21874334	Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21738600-21762000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr10:21747000-21751400	Weak transcription	Fetal Muscle Trunk	muscle
3	chr10:21748000-21751800	Weak transcription	Fetal Muscle Leg	muscle

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