Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21745089..21747569-chr10:21821543..21824085,2	K562	blood:

Variant related genes	Relation type
ENSG00000078403	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10508638	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11012712	0.94[EUR][1000 genomes]
rs11012714	0.96[EUR][1000 genomes]
rs11012718	0.94[EUR][1000 genomes]
rs11596452	0.89[EUR][1000 genomes]
rs12249704	1.00[ASN][1000 genomes]
rs12761415	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12763166	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12767504	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12767955	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12768155	0.80[EUR][1000 genomes]
rs12769344	0.80[EUR][1000 genomes]
rs12770245	0.96[EUR][1000 genomes]
rs12775103	0.80[EUR][1000 genomes]
rs12775112	0.96[EUR][1000 genomes]
rs12775448	0.80[EUR][1000 genomes]
rs12781438	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12783805	0.96[EUR][1000 genomes]
rs34119904	0.87[EUR][1000 genomes]
rs35708372	0.95[EUR][1000 genomes]
rs61850011	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61850014	0.94[EUR][1000 genomes]
rs71491182	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825284	chr10:21739527-21847437	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
2	nsv825285	chr10:21742026-21874334	Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21738600-21762000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr10:21746600-21747000	Enhancers	Fetal Muscle Trunk	muscle
3	chr10:21746600-21748000	Enhancers	Fetal Muscle Leg	muscle

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