Variant report

No.	Distal block	Cell Line	Cell type
1	chr12:62610730..62612651-chr12:62654427..62656091,2	K562	blood:
2	chr12:62610178..62612773-chr12:62634242..62636612,2	K562	blood:
3	chr12:62609057..62611172-chr12:62653238..62655550,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000135655	Chromatin interaction
ENSG00000198673	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11609261	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs11615656	0.81[EUR][1000 genomes]
rs12299115	1.00[CEU][hapmap]
rs17659212	0.81[EUR][1000 genomes]
rs17715440	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs55931991	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56131858	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60968357	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs7296903	0.81[EUR][1000 genomes]
rs7308137	0.92[CEU][hapmap]
rs73130001	0.86[ASN][1000 genomes]
rs73131805	0.86[ASN][1000 genomes]
rs73131832	0.86[ASN][1000 genomes]
rs73133475	0.81[EUR][1000 genomes]
rs73133481	0.81[EUR][1000 genomes]
rs73133484	0.81[EUR][1000 genomes]
rs73135204	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73135207	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73135222	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs930568	1.00[JPT][hapmap]

Variant related diseases (count:1)

Disease	PMID	Source
Pulmonary function decline	22424883	GWAS catalog

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62602200-62614200	Weak transcription	Psoas Muscle	Psoas
2	chr12:62604200-62612400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr12:62607600-62611400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
4	chr12:62607800-62611600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
5	chr12:62608200-62611600	Enhancers	Primary T cells from cord blood	blood
6	chr12:62608400-62611000	Enhancers	Primary T helper naive cells from peripheral blood	blood
7	chr12:62608800-62611200	Weak transcription	Placenta	Placenta
8	chr12:62609200-62612000	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr12:62609200-62620600	Weak transcription	K562	blood
10	chr12:62609800-62612400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
11	chr12:62610800-62611400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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