Variant report

Variant	rs73133475
Chromosome Location	chr12:62604713-62604714
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11609226	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11609261	0.96[EUR][1000 genomes]
rs11612171	0.80[AMR][1000 genomes]
rs11615656	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11615916	0.81[EUR][1000 genomes]
rs17659212	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55931991	0.88[EUR][1000 genomes]
rs56131858	0.98[EUR][1000 genomes]
rs60968357	0.88[EUR][1000 genomes]
rs7139338	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7296903	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7308137	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73131820	0.83[AMR][1000 genomes]
rs73131829	0.83[AMR][1000 genomes]
rs73131836	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73133481	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73133484	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73135204	0.91[EUR][1000 genomes]
rs73135207	0.91[EUR][1000 genomes]
rs73135222	0.88[EUR][1000 genomes]
rs7979000	0.83[AMR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62593200-62609000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr12:62602200-62614200	Weak transcription	Psoas Muscle	Psoas
3	chr12:62602800-62607600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
4	chr12:62604200-62604800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr12:62604200-62605000	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr12:62604200-62612400	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr12:62604400-62605000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr12:62604400-62605000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr12:62604400-62606200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
10	chr12:62604400-62606400	Enhancers	Hela-S3	cervix
11	chr12:62604600-62604800	Enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr12:62604600-62608200	Weak transcription	Primary T cells from cord blood	blood
13	chr12:62604600-62608200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr12:62604600-62608400	Weak transcription	Primary T helper cells PMA-I stimulated	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links