Variant report

Variant rs1166584
Chromosome Location chr1:78261825-78261826
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78246000-78265800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:78246000-78265800 Weak transcription Pancreas Pancrea
3 chr1:78246000-78284200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:78246000-78285600 Weak transcription Colonic Mucosa Colon
5 chr1:78246200-78272000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:78246200-78272800 Weak transcription Psoas Muscle Psoas
7 chr1:78246200-78279400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:78246200-78279600 Weak transcription Aorta Aorta
9 chr1:78246400-78272400 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr1:78246400-78273200 Weak transcription Rectal Smooth Muscle rectum
11 chr1:78246400-78274000 Weak transcription Fetal Kidney kidney
12 chr1:78246400-78287400 Weak transcription Fetal Heart heart
13 chr1:78246600-78274200 Weak transcription HMEC breast
14 chr1:78247400-78278400 Weak transcription Hela-S3 cervix
15 chr1:78247600-78262200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:78247600-78272400 Weak transcription Colon Smooth Muscle Colon
17 chr1:78248600-78288200 Weak transcription Small Intestine intestine
18 chr1:78249200-78271400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:78249800-78265200 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr1:78250400-78282400 Weak transcription NHEK skin
21 chr1:78250600-78262200 Weak transcription HUVEC blood vessel
22 chr1:78250600-78264200 Weak transcription K562 blood
23 chr1:78250600-78279000 Weak transcription NHLF lung
24 chr1:78250800-78262200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:78250800-78268000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:78251000-78266200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:78252000-78262200 Weak transcription Gastric stomach
28 chr1:78252000-78262800 Strong transcription Fetal Stomach stomach
29 chr1:78252000-78272600 Weak transcription Spleen Spleen
30 chr1:78252000-78272800 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:78252200-78282600 Weak transcription Right Ventricle heart
32 chr1:78252200-78315800 Weak transcription Esophagus oesophagus
33 chr1:78252400-78262200 Weak transcription Brain Hippocampus Middle brain
34 chr1:78252800-78262200 Weak transcription Brain Substantia Nigra brain
35 chr1:78252800-78272800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:78253000-78262200 Weak transcription Brain Angular Gyrus brain
37 chr1:78253000-78266800 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr1:78253000-78267200 Weak transcription Duodenum Mucosa Duodenum
39 chr1:78253000-78267800 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:78253000-78272800 Weak transcription Thymus Thymus
41 chr1:78253000-78273200 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:78253000-78279400 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr1:78253000-78283800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr1:78253600-78269800 Weak transcription Brain Germinal Matrix brain
45 chr1:78254200-78262200 Weak transcription Osteobl bone
46 chr1:78254400-78262200 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:78254400-78267800 Weak transcription Fetal Lung lung
48 chr1:78254400-78272800 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:78254400-78274000 Weak transcription HSMMtube muscle
50 chr1:78254400-78287200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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