The 2.0 version of rSNPBase

Variant report

Variant rs278857
Chromosome Location chr1:78135734-78135735
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78099000-78147200 Weak transcription Gastric stomach
2 chr1:78107600-78146000 Weak transcription Fetal Kidney kidney
3 chr1:78110400-78138000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:78111200-78147200 Weak transcription Esophagus oesophagus
5 chr1:78111400-78137400 Weak transcription HUVEC blood vessel
6 chr1:78111400-78137600 Weak transcription Hela-S3 cervix
7 chr1:78112200-78139000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:78114800-78135800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:78116800-78144600 Weak transcription NHEK skin
10 chr1:78117200-78144400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:78117400-78137200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:78117400-78138000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:78117400-78141800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:78117400-78147200 Weak transcription Primary monocytes fromperipheralblood blood
15 chr1:78117600-78137400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:78117600-78137600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:78117600-78138200 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:78117600-78139800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr1:78117600-78146000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:78117600-78147200 Weak transcription Thymus Thymus
21 chr1:78118200-78137200 Weak transcription Duodenum Mucosa Duodenum
22 chr1:78118600-78146000 Weak transcription Primary B cells from peripheral blood blood
23 chr1:78119000-78139000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:78119000-78145600 Weak transcription Primary hematopoietic stem cells blood
25 chr1:78119000-78146000 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:78119400-78147200 Weak transcription Fetal Muscle Leg muscle
27 chr1:78120800-78147200 Weak transcription Lung lung
28 chr1:78121400-78137600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:78121400-78137600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:78121600-78137600 Weak transcription A549 lung
31 chr1:78123800-78139400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:78124600-78146000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:78125800-78136000 Weak transcription Spleen Spleen
34 chr1:78127000-78146400 Weak transcription Primary B cells from cord blood blood
35 chr1:78127400-78139800 Weak transcription Rectal Smooth Muscle rectum
36 chr1:78128800-78137200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:78128800-78141000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:78128800-78141800 Weak transcription Fetal Intestine Small intestine
39 chr1:78131000-78141800 Weak transcription Fetal Stomach stomach
40 chr1:78131000-78146800 Weak transcription Fetal Brain Female brain
41 chr1:78131200-78136000 Weak transcription Brain Angular Gyrus brain
42 chr1:78131200-78136400 Weak transcription Brain Anterior Caudate brain
43 chr1:78131200-78136400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:78131200-78136600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr1:78131200-78137200 Weak transcription HSMMtube muscle
46 chr1:78131200-78137400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:78131200-78137600 Weak transcription HepG2 liver
48 chr1:78131400-78137000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:78131800-78137600 Weak transcription Psoas Muscle Psoas
50 chr1:78131800-78139000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015