The 2.0 version of rSNPBase

Variant report

Variant rs278833
Chromosome Location chr1:78157949-78157950
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78149600-78175000 Weak transcription Gastric stomach
2 chr1:78149600-78177800 Weak transcription Spleen Spleen
3 chr1:78149800-78158800 Weak transcription Left Ventricle heart
4 chr1:78149800-78159800 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:78149800-78165600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:78149800-78165600 Weak transcription Esophagus oesophagus
7 chr1:78149800-78165600 Weak transcription Lung lung
8 chr1:78149800-78171800 Weak transcription Fetal Brain Male brain
9 chr1:78149800-78173000 Weak transcription Colonic Mucosa Colon
10 chr1:78149800-78173800 Weak transcription Aorta Aorta
11 chr1:78149800-78178000 Weak transcription Small Intestine intestine
12 chr1:78150000-78158600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:78150000-78158800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:78150000-78158800 Weak transcription Fetal Brain Female brain
15 chr1:78150000-78160800 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:78150000-78160800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:78150000-78161600 Weak transcription Brain Cingulate Gyrus brain
18 chr1:78150000-78162000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr1:78150000-78163000 Weak transcription Stomach Smooth Muscle stomach
20 chr1:78150000-78165200 Weak transcription Brain Angular Gyrus brain
21 chr1:78150000-78166000 Weak transcription HSMMtube muscle
22 chr1:78150000-78172800 Weak transcription Colon Smooth Muscle Colon
23 chr1:78150000-78173000 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:78150000-78173000 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr1:78150000-78173600 Weak transcription Psoas Muscle Psoas
26 chr1:78150000-78174000 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:78150000-78175600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr1:78150200-78158000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:78150200-78158000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:78150200-78158800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:78150200-78158800 Weak transcription HSMM muscle
32 chr1:78150200-78159800 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:78150200-78160800 Weak transcription Brain Germinal Matrix brain
34 chr1:78150200-78160800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:78150200-78161000 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr1:78150200-78170400 Weak transcription HUVEC blood vessel
37 chr1:78150200-78172600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:78150200-78173400 Weak transcription HMEC breast
39 chr1:78150200-78175600 Weak transcription Brain Substantia Nigra brain
40 chr1:78150400-78159800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:78150400-78165000 Weak transcription Brain Anterior Caudate brain
42 chr1:78150400-78165600 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr1:78150400-78172400 Weak transcription Hela-S3 cervix
44 chr1:78150400-78174000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:78150600-78165000 Weak transcription Muscle Satellite Cultured Cells --
46 chr1:78150800-78170400 Weak transcription K562 blood
47 chr1:78151000-78158200 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr1:78151000-78158800 Weak transcription NHLF lung
49 chr1:78151200-78158600 Weak transcription Dnd41 blood
50 chr1:78151200-78165400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015