Variant report

Variant rs278860
Chromosome Location chr1:78138955-78138956
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78099000-78147200 Weak transcription Gastric stomach
2 chr1:78107600-78146000 Weak transcription Fetal Kidney kidney
3 chr1:78111200-78147200 Weak transcription Esophagus oesophagus
4 chr1:78112200-78139000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:78116800-78144600 Weak transcription NHEK skin
6 chr1:78117200-78144400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr1:78117400-78141800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:78117400-78147200 Weak transcription Primary monocytes fromperipheralblood blood
9 chr1:78117600-78139800 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:78117600-78146000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:78117600-78147200 Weak transcription Thymus Thymus
12 chr1:78118600-78146000 Weak transcription Primary B cells from peripheral blood blood
13 chr1:78119000-78139000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:78119000-78145600 Weak transcription Primary hematopoietic stem cells blood
15 chr1:78119000-78146000 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr1:78119400-78147200 Weak transcription Fetal Muscle Leg muscle
17 chr1:78120800-78147200 Weak transcription Lung lung
18 chr1:78123800-78139400 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr1:78124600-78146000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:78127000-78146400 Weak transcription Primary B cells from cord blood blood
21 chr1:78127400-78139800 Weak transcription Rectal Smooth Muscle rectum
22 chr1:78128800-78141000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:78128800-78141800 Weak transcription Fetal Intestine Small intestine
24 chr1:78131000-78141800 Weak transcription Fetal Stomach stomach
25 chr1:78131000-78146800 Weak transcription Fetal Brain Female brain
26 chr1:78131800-78139000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:78131800-78145000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:78132000-78144200 Weak transcription Adipose Nuclei Adipose
29 chr1:78132000-78147200 Weak transcription Right Ventricle heart
30 chr1:78132200-78139000 Weak transcription Left Ventricle heart
31 chr1:78132200-78139000 Weak transcription Pancreas Pancrea
32 chr1:78132200-78141800 Weak transcription Primary T cells fromperipheralblood blood
33 chr1:78133800-78143600 Weak transcription Fetal Intestine Large intestine
34 chr1:78135000-78146800 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr1:78135200-78139200 Weak transcription Fetal Heart heart
36 chr1:78135200-78141000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:78135800-78139200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr1:78136400-78139400 Enhancers Primary T helper cells PMA-I stimulated --
39 chr1:78136400-78147200 Weak transcription Spleen Spleen
40 chr1:78136600-78139000 Weak transcription Ovary ovary
41 chr1:78136600-78139400 Enhancers Primary T cells from cord blood blood
42 chr1:78136600-78139400 Enhancers Liver Liver
43 chr1:78136800-78139800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:78136800-78147200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:78137000-78140200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:78137400-78143600 Weak transcription Duodenum Mucosa Duodenum
47 chr1:78137600-78139000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:78137600-78139800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:78137600-78139800 Enhancers Colon Smooth Muscle Colon
50 chr1:78137600-78145000 Weak transcription Small Intestine intestine

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