The 2.0 version of rSNPBase

Variant report

Variant rs278834
Chromosome Location chr1:78119307-78119308
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78099000-78147200 Weak transcription Gastric stomach
2 chr1:78099200-78120800 Weak transcription Small Intestine intestine
3 chr1:78099200-78132400 Weak transcription Colon Smooth Muscle Colon
4 chr1:78100800-78133200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:78105200-78131800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:78105400-78120600 Weak transcription NH-A brain
7 chr1:78105800-78122400 Weak transcription HMEC breast
8 chr1:78107600-78146000 Weak transcription Fetal Kidney kidney
9 chr1:78110400-78138000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:78111200-78120200 Weak transcription Placenta Placenta
11 chr1:78111200-78125600 Weak transcription HSMM muscle
12 chr1:78111200-78147200 Weak transcription Esophagus oesophagus
13 chr1:78111400-78120600 Weak transcription Lung lung
14 chr1:78111400-78123200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:78111400-78125400 Weak transcription Left Ventricle heart
16 chr1:78111400-78127200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:78111400-78128000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr1:78111400-78130800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:78111400-78137400 Weak transcription HUVEC blood vessel
20 chr1:78111400-78137600 Weak transcription Hela-S3 cervix
21 chr1:78112200-78139000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:78114800-78135000 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:78114800-78135800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:78116200-78122000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:78116800-78119400 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:78116800-78121400 Weak transcription Brain Cingulate Gyrus brain
27 chr1:78116800-78144600 Weak transcription NHEK skin
28 chr1:78117000-78120600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr1:78117000-78120800 Weak transcription Aorta Aorta
30 chr1:78117000-78121400 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr1:78117000-78122800 Weak transcription Fetal Muscle Trunk muscle
32 chr1:78117000-78124000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:78117000-78128200 Weak transcription Fetal Intestine Large intestine
34 chr1:78117000-78128200 Weak transcription Fetal Stomach stomach
35 chr1:78117000-78130000 Weak transcription Fetal Lung lung
36 chr1:78117000-78130600 Weak transcription Liver Liver
37 chr1:78117000-78130600 Weak transcription Brain Angular Gyrus brain
38 chr1:78117000-78130800 Weak transcription K562 blood
39 chr1:78117200-78144400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:78117400-78120400 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:78117400-78120600 Weak transcription HepG2 liver
42 chr1:78117400-78120600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:78117400-78120800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:78117400-78121400 Weak transcription Fetal Brain Female brain
45 chr1:78117400-78122800 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:78117400-78123000 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr1:78117400-78134800 Weak transcription Osteobl bone
48 chr1:78117400-78137200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:78117400-78138000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:78117400-78141800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015