Variant report

Variant rs12026939
Chromosome Location chr1:78075002-78075003
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78047600-78085600 Weak transcription NHLF lung
2 chr1:78047800-78086200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:78047800-78090000 Weak transcription NH-A brain
4 chr1:78048000-78077800 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:78048000-78097400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:78059000-78083200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:78063200-78083000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:78063600-78097600 Weak transcription Fetal Brain Male brain
9 chr1:78064200-78075200 Weak transcription HepG2 liver
10 chr1:78070600-78098000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:78071000-78075200 Weak transcription H1 Cell Line embryonic stem cell
12 chr1:78071000-78098000 Weak transcription Colonic Mucosa Colon
13 chr1:78071200-78085600 Weak transcription HUVEC blood vessel
14 chr1:78071200-78098000 Weak transcription Small Intestine intestine
15 chr1:78071400-78097800 Weak transcription Aorta Aorta
16 chr1:78071800-78082800 Weak transcription Osteobl bone
17 chr1:78071800-78097800 Weak transcription Ovary ovary
18 chr1:78071800-78097800 Weak transcription Pancreas Pancrea
19 chr1:78072000-78080600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:78072000-78094600 Weak transcription Left Ventricle heart
21 chr1:78072000-78097600 Weak transcription Gastric stomach
22 chr1:78072200-78083400 Weak transcription Thymus Thymus
23 chr1:78072200-78086400 Weak transcription HMEC breast
24 chr1:78072200-78090600 Weak transcription Primary monocytes fromperipheralblood blood
25 chr1:78072200-78098000 Weak transcription Spleen Spleen
26 chr1:78072400-78087200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:78072400-78097800 Weak transcription Lung lung
28 chr1:78072600-78080600 Weak transcription HSMM muscle
29 chr1:78072600-78086200 Weak transcription Fetal Thymus thymus
30 chr1:78072600-78097800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:78072800-78086400 Weak transcription Fetal Kidney kidney
32 chr1:78073000-78090000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:78073200-78097400 Weak transcription Stomach Smooth Muscle stomach
34 chr1:78073600-78075400 ZNF genes & repeats Primary hematopoietic stem cells blood
35 chr1:78073600-78076000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:78073600-78076400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:78073600-78082200 Weak transcription Fetal Intestine Small intestine
38 chr1:78073600-78086800 Weak transcription Fetal Stomach stomach
39 chr1:78073800-78076600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:78073800-78078200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:78074000-78075400 ZNF genes & repeats Fetal Lung lung
42 chr1:78074000-78075600 ZNF genes & repeats Adipose Nuclei Adipose
43 chr1:78074000-78076000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
44 chr1:78074000-78076600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:78074000-78077400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:78074200-78075400 ZNF genes & repeats Primary B cells from peripheral blood blood
47 chr1:78074200-78076400 ZNF genes & repeats Primary B cells from cord blood blood
48 chr1:78074200-78076600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:78074400-78075400 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:78074400-78075400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood

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