Variant report

Variant rs11699487
Chromosome Location chr20:24995165-24995166
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24976000-24999000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr20:24981600-25003600 Weak transcription Fetal Heart heart
3 chr20:24981800-24997200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr20:24983200-24996800 Strong transcription Primary B cells from peripheral blood blood
5 chr20:24983200-25003800 Strong transcription Primary T cells fromperipheralblood blood
6 chr20:24983200-25005000 Strong transcription Primary T helper cells fromperipheralblood blood
7 chr20:24983200-25007800 Strong transcription Primary T cells from cord blood blood
8 chr20:24983200-25008200 Strong transcription Primary B cells from cord blood blood
9 chr20:24983400-24995400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr20:24983400-24996600 Strong transcription Placenta Placenta
11 chr20:24983800-25006800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr20:24984600-24997200 Strong transcription Fetal Intestine Large intestine
13 chr20:24985000-24997200 Strong transcription Fetal Muscle Trunk muscle
14 chr20:24985000-24997600 Strong transcription Fetal Intestine Small intestine
15 chr20:24985000-25004400 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr20:24985000-25005600 Strong transcription Primary T helper naive cells fromperipheralblood blood
17 chr20:24985200-24995800 Strong transcription Sigmoid Colon Sigmoid Colon
18 chr20:24985200-25002600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr20:24985200-25003200 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr20:24985200-25007800 Strong transcription Fetal Muscle Leg muscle
21 chr20:24985600-24996600 Strong transcription Duodenum Mucosa Duodenum
22 chr20:24985800-24995800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr20:24985800-24997200 Strong transcription Lung lung
24 chr20:24985800-24997600 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr20:24985800-25002400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
26 chr20:24985800-25004200 Strong transcription Thymus Thymus
27 chr20:24985800-25004400 Strong transcription Primary monocytes fromperipheralblood blood
28 chr20:24985800-25005000 Strong transcription Adipose Nuclei Adipose
29 chr20:24985800-25005800 Strong transcription Spleen Spleen
30 chr20:24985800-25006800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr20:24985800-25007600 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr20:24985800-25007800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
33 chr20:24986000-24996200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr20:24986000-25004800 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr20:24986200-25012400 Strong transcription Dnd41 blood
36 chr20:24986400-24997000 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr20:24986400-25003800 Strong transcription Aorta Aorta
38 chr20:24986400-25004400 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr20:24986400-25012400 Weak transcription Fetal Brain Male brain
40 chr20:24986600-24995800 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr20:24986600-24995800 Strong transcription Fetal Thymus thymus
42 chr20:24986600-24997400 Strong transcription Ovary ovary
43 chr20:24986800-24997200 Strong transcription Brain Germinal Matrix brain
44 chr20:24987000-24997400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr20:24987200-24996600 Strong transcription Fetal Stomach stomach
46 chr20:24987400-25005200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr20:24987600-25007800 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr20:24988200-25016400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr20:24989400-24995600 Genic enhancers Pancreas Pancrea
50 chr20:24990000-24996000 Weak transcription A549 lung

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