The 2.0 version of rSNPBase

Variant report

Variant rs11710717
Chromosome Location chr3:133334971-133334972
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:133306400-133342800 Weak transcription Colonic Mucosa Colon
2 chr3:133307200-133335800 Weak transcription Pancreas Pancrea
3 chr3:133307400-133347200 Weak transcription Brain Angular Gyrus brain
4 chr3:133308000-133335400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr3:133308200-133342200 Weak transcription Brain Substantia Nigra brain
6 chr3:133308200-133356000 Weak transcription Colon Smooth Muscle Colon
7 chr3:133308600-133347600 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:133308600-133349200 Weak transcription Esophagus oesophagus
9 chr3:133308600-133351600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr3:133308600-133352200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr3:133310800-133335000 Weak transcription Aorta Aorta
12 chr3:133310800-133349400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr3:133314200-133335400 Weak transcription NHLF lung
14 chr3:133314800-133335800 Weak transcription HSMMtube muscle
15 chr3:133314800-133349200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr3:133314800-133351600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr3:133316600-133377600 Strong transcription Dnd41 blood
18 chr3:133316600-133378000 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr3:133317000-133378200 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr3:133317200-133378800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr3:133318400-133378600 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr3:133319000-133363800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr3:133322200-133378200 Strong transcription HUES64 Cell Line embryonic stem cell
24 chr3:133322600-133378800 Weak transcription Stomach Mucosa stomach
25 chr3:133323200-133341000 Strong transcription Cortex derived primary cultured neurospheres brain
26 chr3:133323200-133378200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr3:133323200-133378400 Strong transcription Fetal Thymus thymus
28 chr3:133323200-133378800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr3:133323400-133378200 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr3:133323600-133377800 Strong transcription Primary monocytes fromperipheralblood blood
31 chr3:133323800-133378800 Strong transcription iPS-20b Cell Line embryonic stem cell
32 chr3:133324200-133378200 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr3:133324400-133338600 Strong transcription Primary B cells from peripheral blood blood
34 chr3:133325000-133345000 Weak transcription Psoas Muscle Psoas
35 chr3:133325200-133352800 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr3:133325200-133353000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr3:133325400-133348200 Strong transcription iPS-18 Cell Line embryonic stem cell
38 chr3:133326200-133347800 Strong transcription Fetal Intestine Large intestine
39 chr3:133326400-133337400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr3:133326400-133337600 Strong transcription Fetal Muscle Trunk muscle
41 chr3:133326600-133337800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr3:133327000-133335800 Weak transcription NHEK skin
43 chr3:133327000-133362400 Weak transcription Small Intestine intestine
44 chr3:133327400-133337000 Weak transcription Ovary ovary
45 chr3:133327600-133336000 Weak transcription Rectal Smooth Muscle rectum
46 chr3:133327600-133338600 Weak transcription Brain Inferior Temporal Lobe brain
47 chr3:133327600-133351600 Weak transcription Brain Cingulate Gyrus brain
48 chr3:133328000-133335200 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr3:133328000-133356400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr3:133328600-133335800 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015