Variant report

Variant	rs11726994
Chromosome Location	chr4:128097963-128097964
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11727022	0.88[ASN][1000 genomes]
rs11929956	0.88[ASN][1000 genomes]
rs12639817	0.88[ASN][1000 genomes]
rs13102188	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13111116	0.85[ASN][1000 genomes]
rs13111239	0.88[ASN][1000 genomes]
rs13111610	0.85[ASN][1000 genomes]
rs13117384	0.85[ASN][1000 genomes]
rs13118101	0.89[ASN][1000 genomes]
rs13130460	0.80[ASN][1000 genomes]
rs13148721	0.85[ASN][1000 genomes]
rs1480905	0.85[ASN][1000 genomes]
rs1480906	0.85[ASN][1000 genomes]
rs34042860	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35899860	0.80[ASN][1000 genomes]
rs4560424	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4834181	0.83[ASN][1000 genomes]
rs67169994	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6817083	0.86[ASN][1000 genomes]
rs6823821	0.82[ASN][1000 genomes]
rs7676467	0.88[ASN][1000 genomes]
rs899933	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128096200-128099600	Weak transcription	Colon Smooth Muscle	Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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