Variant report

Variant	rs4834181
Chromosome Location	chr4:128087527-128087528
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10857123	0.86[ASN][1000 genomes]
rs11726994	0.83[ASN][1000 genomes]
rs11727022	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11929956	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12639817	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13107241	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13111116	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13111239	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13111610	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13117384	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13123189	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13127462	0.86[ASN][1000 genomes]
rs13130460	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13131457	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13135599	0.85[ASN][1000 genomes]
rs13135955	0.85[ASN][1000 genomes]
rs13148721	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1480905	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1480906	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17012108	0.86[ASN][1000 genomes]
rs35899860	0.88[ASN][1000 genomes]
rs4833369	0.86[ASN][1000 genomes]
rs4834179	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4834180	0.86[ASN][1000 genomes]
rs6817083	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6823821	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7658955	0.86[ASN][1000 genomes]
rs7659106	0.86[ASN][1000 genomes]
rs7676467	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7682967	0.84[ASN][1000 genomes]
rs7683191	0.86[ASN][1000 genomes]
rs7683469	0.86[ASN][1000 genomes]
rs899933	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128087000-128087600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr4:128087400-128087600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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