Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11739301	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11740706	0.92[EUR][1000 genomes]
rs11740809	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11746561	0.92[EUR][1000 genomes]
rs58010984	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60270014	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60430653	0.93[EUR][1000 genomes]
rs62367768	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62367770	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62367771	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62367773	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62367774	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62367819	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62367823	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62367824	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62367825	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62367828	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs68151843	0.92[EUR][1000 genomes]
rs6862785	0.83[ASN][1000 genomes]
rs6863199	0.81[ASN][1000 genomes]
rs7711625	0.89[EUR][1000 genomes]
rs7719022	0.97[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518286	chr5:74169045-74243120	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv968210	chr5:74173768-74181141	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74174000-74181000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr5:74176400-74181000	Weak transcription	HepG2	liver
3	chr5:74180000-74181200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr5:74180000-74185200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr5:74180000-74185200	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr5:74180000-74185200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr5:74180200-74181200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr5:74180200-74185200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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