Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11738903	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11739301	0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11740706	0.90[EUR][1000 genomes]
rs11740809	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11746561	0.92[EUR][1000 genomes]
rs58010984	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60270014	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60430653	0.91[EUR][1000 genomes]
rs62367768	0.92[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs62367770	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62367771	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62367773	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62367774	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62367823	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62367824	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62367825	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62367828	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs68151843	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6862785	0.81[ASN][1000 genomes]
rs7711625	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518286	chr5:74169045-74243120	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv965527	chr5:74181141-74195624	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74180000-74185200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr5:74180000-74185200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr5:74180000-74185200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr5:74180200-74185200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr5:74181600-74183400	Weak transcription	HepG2	liver

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