Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:74185368..74187105-chr5:74187423..74188982,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10942721	0.85[ASN][1000 genomes]
rs10942722	0.85[ASN][1000 genomes]
rs10942723	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11739370	0.83[CHB][hapmap];0.81[JPT][hapmap]
rs11745011	0.91[ASN][1000 genomes]
rs11745016	0.91[ASN][1000 genomes]
rs11745686	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11746386	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12519932	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1455786	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs55979253	0.91[ASN][1000 genomes]
rs56831970	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58925145	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62367818	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62367823	0.86[AFR][1000 genomes]
rs6453091	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6894292	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7700681	0.90[CHB][hapmap];0.83[JPT][hapmap];0.83[ASN][1000 genomes]
rs7719022	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7721009	0.80[EUR][1000 genomes]
rs7722489	0.81[CHB][hapmap];0.86[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518286	chr5:74169045-74243120	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv965527	chr5:74181141-74195624	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74184600-74186800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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