Variant report
| Variant | rs11758516 |
|---|---|
| Chromosome Location | chr6:30043486-30043487 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:30038400-30044000 | Bivalent/Poised TSS | iPS-15b Cell Line | embryonic stem cell |
| 2 | chr6:30041200-30043600 | Active TSS | Esophagus | oesophagus |
| 3 | chr6:30041800-30043600 | Flanking Bivalent TSS/Enh | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr6:30041800-30043600 | Flanking Bivalent TSS/Enh | Ganglion Eminence derived primary cultured neurospheres | brain |
| 5 | chr6:30041800-30044000 | Bivalent/Poised TSS | HUES48 Cell Line | embryonic stem cell |
| 6 | chr6:30041800-30044200 | Bivalent/Poised TSS | HUES64 Cell Line | embryonic stem cell |
| 7 | chr6:30042000-30043600 | Bivalent Enhancer | Primary B cells from peripheral blood | blood |
| 8 | chr6:30042000-30043600 | Bivalent Enhancer | Fetal Heart | heart |
| 9 | chr6:30042000-30043800 | Bivalent Enhancer | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 10 | chr6:30042000-30043800 | Bivalent Enhancer | Primary T helper memory cells from peripheral blood 1 | blood |
| 11 | chr6:30042000-30043800 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
| 12 | chr6:30042000-30043800 | Bivalent/Poised TSS | Thymus | Thymus |
| 13 | chr6:30042000-30044000 | Bivalent/Poised TSS | ES-I3 Cell Line | embryonic stem cell |
| 14 | chr6:30042000-30044000 | Bivalent Enhancer | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 15 | chr6:30042000-30044000 | Bivalent/Poised TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
| 16 | chr6:30042000-30044200 | Flanking Active TSS | HMEC | breast |
| 17 | chr6:30042200-30043600 | Bivalent/Poised TSS | ES-WA7 Cell Line | embryonic stem cell |
| 18 | chr6:30042200-30043600 | Bivalent/Poised TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 19 | chr6:30042200-30043600 | Flanking Bivalent TSS/Enh | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 20 | chr6:30042200-30043600 | Bivalent/Poised TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 21 | chr6:30042200-30043600 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 22 | chr6:30042200-30043600 | Bivalent Enhancer | Primary Natural Killer cells fromperipheralblood | blood |
| 23 | chr6:30042200-30043600 | Flanking Active TSS | Right Ventricle | heart |
| 24 | chr6:30042200-30043600 | Flanking Bivalent TSS/Enh | Stomach Smooth Muscle | stomach |
| 25 | chr6:30042200-30043800 | Flanking Bivalent TSS/Enh | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 26 | chr6:30042200-30043800 | Flanking Bivalent TSS/Enh | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 27 | chr6:30042200-30043800 | Flanking Bivalent TSS/Enh | Colonic Mucosa | Colon |
| 28 | chr6:30042200-30043800 | Flanking Bivalent TSS/Enh | Placenta | Placenta |
| 29 | chr6:30042200-30043800 | Flanking Active TSS | Pancreas | Pancrea |
| 30 | chr6:30042200-30044000 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
| 31 | chr6:30042200-30044000 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 32 | chr6:30042200-30044200 | Bivalent/Poised TSS | iPS-20b Cell Line | embryonic stem cell |
| 33 | chr6:30042200-30044400 | Bivalent/Poised TSS | iPS-18 Cell Line | embryonic stem cell |
| 34 | chr6:30042400-30043600 | Bivalent/Poised TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 35 | chr6:30042400-30043600 | Flanking Bivalent TSS/Enh | IMR90 fetal lung fibroblasts Cell Line | lung |
| 36 | chr6:30042400-30043600 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 37 | chr6:30042400-30043600 | Flanking Bivalent TSS/Enh | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr6:30042400-30043600 | Flanking Bivalent TSS/Enh | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 39 | chr6:30042400-30043600 | Bivalent Enhancer | Brain Anterior Caudate | brain |
| 40 | chr6:30042400-30043600 | Flanking Bivalent TSS/Enh | Fetal Stomach | stomach |
| 41 | chr6:30042400-30043800 | Flanking Bivalent TSS/Enh | Fetal Intestine Small | intestine |
| 42 | chr6:30042600-30043600 | Flanking Bivalent TSS/Enh | H9 Derived Neuron Cultured Cells | ES cell derived |
| 43 | chr6:30042600-30043600 | Flanking Bivalent TSS/Enh | iPS DF 19.11 Cell Line | embryonic stem cell |
| 44 | chr6:30042600-30043600 | Flanking Bivalent TSS/Enh | Adipose Nuclei | Adipose |
| 45 | chr6:30042600-30043600 | Active TSS | Gastric | stomach |
| 46 | chr6:30042600-30043600 | Bivalent Enhancer | NHLF | lung |
| 47 | chr6:30042600-30043800 | Bivalent Enhancer | Liver | Liver |
| 48 | chr6:30042600-30043800 | Flanking Bivalent TSS/Enh | Fetal Intestine Large | intestine |
| 49 | chr6:30042600-30044000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
| 50 | chr6:30042800-30043600 | Active TSS | Pancreatic Islets | Pancreatic Islet |
